Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
FOXC1Q12948 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.23□□□□□ -1.41
FOXC1Q12948 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
FOXC1Q12948 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC6.23□□□□□ -1.41
FOXC1Q12948 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.23□□□□□ -1.41
FOXC1Q12948 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
FOXC1Q12948 RNY1P16-201ENST00000363063 111 ntBASIC6.23□□□□□ -1.41
FOXC1Q12948 Y_RNA.151-201ENST00000363566 112 ntBASIC6.23□□□□□ -1.41
FOXC1Q12948 Y_RNA.240-201ENST00000364469 95 ntBASIC6.23□□□□□ -1.41
FOXC1Q12948 SNORA70.3-201ENST00000365075 132 ntBASIC6.23□□□□□ -1.41
FOXC1Q12948 Y_RNA.353-201ENST00000365440 108 ntBASIC6.23□□□□□ -1.41
FOXC1Q12948 Y_RNA.418-201ENST00000384029 102 ntBASIC6.23□□□□□ -1.41
FOXC1Q12948 RNU6-393P-201ENST00000384475 107 ntBASIC6.23□□□□□ -1.41
FOXC1Q12948 RNU6-278P-201ENST00000390945 109 ntBASIC6.23□□□□□ -1.41
FOXC1Q12948 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
FOXC1Q12948 RNU4-78P-201ENST00000410940 126 ntBASIC6.23□□□□□ -1.41
FOXC1Q12948 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC6.23□□□□□ -1.41
FOXC1Q12948 AL355433.1-201ENST00000422804 300 ntBASIC6.23□□□□□ -1.41
FOXC1Q12948 AL354766.1-201ENST00000423396 542 ntBASIC6.23□□□□□ -1.41
FOXC1Q12948 AC010154.1-201ENST00000425857 269 ntBASIC6.23□□□□□ -1.41
FOXC1Q12948 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.23□□□□□ -1.41
FOXC1Q12948 AC087650.1-201ENST00000431445 468 ntBASIC6.23□□□□□ -1.41
FOXC1Q12948 AL163193.1-201ENST00000444895 788 ntBASIC6.23□□□□□ -1.41
FOXC1Q12948 RPL7L1P11-201ENST00000446092 721 ntBASIC6.23□□□□□ -1.41
FOXC1Q12948 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC6.23□□□□□ -1.41
FOXC1Q12948 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.23□□□□□ -1.41
FOXC1Q12948 COX6CP14-201ENST00000469580 174 ntBASIC6.23□□□□□ -1.41
FOXC1Q12948 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC6.23□□□□□ -1.41
FOXC1Q12948 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
FOXC1Q12948 AC108078.2-201ENST00000510750 236 ntBASIC6.23□□□□□ -1.41
FOXC1Q12948 AC016559.2-201ENST00000510759 359 ntBASIC6.23□□□□□ -1.41
FOXC1Q12948 AL359273.1-201ENST00000510918 627 ntBASIC6.23□□□□□ -1.41
FOXC1Q12948 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.23□□□□□ -1.41
FOXC1Q12948 Y_RNA.667-201ENST00000516212 107 ntBASIC6.23□□□□□ -1.41
FOXC1Q12948 SNORA72.7-201ENST00000516349 94 ntBASIC6.23□□□□□ -1.41
FOXC1Q12948 RAB9BP1-201ENST00000519581 626 ntBASIC6.23□□□□□ -1.41
FOXC1Q12948 FAM60DP-201ENST00000524174 632 ntBASIC6.23□□□□□ -1.41
FOXC1Q12948 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.23□□□□□ -1.41
FOXC1Q12948 AC018552.1-201ENST00000562099 811 ntBASIC6.23□□□□□ -1.41
FOXC1Q12948 AC009852.2-201ENST00000567898 485 ntBASIC6.23□□□□□ -1.41
FOXC1Q12948 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
FOXC1Q12948 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC6.23□□□□□ -1.41
FOXC1Q12948 PSMA6P4-201ENST00000603247 718 ntBASIC6.23□□□□□ -1.41
FOXC1Q12948 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
FOXC1Q12948 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.23□□□□□ -1.41
FOXC1Q12948 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
FOXC1Q12948 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.23□□□□□ -1.41
FOXC1Q12948 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
FOXC1Q12948 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
FOXC1Q12948 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
FOXC1Q12948 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
FOXC1Q12948 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
FOXC1Q12948 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.23□□□□□ -1.41
FOXC1Q12948 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
FOXC1Q12948 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
FOXC1Q12948 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
FOXC1Q12948 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
FOXC1Q12948 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC6.23□□□□□ -1.41
FOXC1Q12948 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.23□□□□□ -1.41
FOXC1Q12948 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
FOXC1Q12948 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
FOXC1Q12948 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
FOXC1Q12948 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
FOXC1Q12948 AGTPBP1-202ENST00000357081 4393 ntTSL 5 BASIC6.22□□□□□ -1.41
FOXC1Q12948 AC083806.2-201ENST00000617795 2685 ntBASIC6.22□□□□□ -1.41
FOXC1Q12948 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.22□□□□□ -1.41
FOXC1Q12948 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.22□□□□□ -1.41
FOXC1Q12948 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXC1Q12948 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.22□□□□□ -1.41
FOXC1Q12948 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
FOXC1Q12948 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXC1Q12948 AL512662.1-201ENST00000624850 2251 ntBASIC6.22□□□□□ -1.41
FOXC1Q12948 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXC1Q12948 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC6.22□□□□□ -1.41
FOXC1Q12948 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXC1Q12948 RNU6-1298P-201ENST00000362456 101 ntBASIC6.22□□□□□ -1.41
FOXC1Q12948 Y_RNA.48-201ENST00000362710 103 ntBASIC6.22□□□□□ -1.41
FOXC1Q12948 RN7SKP292-201ENST00000365522 317 ntBASIC6.22□□□□□ -1.41
FOXC1Q12948 Y_RNA.383-201ENST00000383855 97 ntBASIC6.22□□□□□ -1.41
FOXC1Q12948 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
FOXC1Q12948 Y_RNA.626-201ENST00000411288 95 ntBASIC6.22□□□□□ -1.41
FOXC1Q12948 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.22□□□□□ -1.41
FOXC1Q12948 AL035461.1-201ENST00000421490 332 ntBASIC6.22□□□□□ -1.41
FOXC1Q12948 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.22□□□□□ -1.41
FOXC1Q12948 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.22□□□□□ -1.41
FOXC1Q12948 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC6.22□□□□□ -1.41
FOXC1Q12948 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC6.22□□□□□ -1.41
FOXC1Q12948 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.22□□□□□ -1.41
FOXC1Q12948 AC126177.3-201ENST00000551839 688 ntBASIC6.22□□□□□ -1.41
FOXC1Q12948 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.22□□□□□ -1.41
FOXC1Q12948 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.22□□□□□ -1.41
FOXC1Q12948 AL359547.2-201ENST00000615810 418 ntBASIC6.22□□□□□ -1.41
FOXC1Q12948 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXC1Q12948 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
FOXC1Q12948 AC011632.1-202ENST00000518128 2810 ntTSL 2 BASIC6.22□□□□□ -1.41
FOXC1Q12948 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXC1Q12948 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXC1Q12948 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXC1Q12948 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
FOXC1Q12948 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms