Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.18□□□□□ -1.74
GABPAQ06546 MTND4LP24-201ENST00000572277 291 ntBASIC4.18□□□□□ -1.74
GABPAQ06546 KLKP1-201ENST00000595979 403 ntBASIC4.18□□□□□ -1.74
GABPAQ06546 VN1R9P-201ENST00000614184 867 ntBASIC4.18□□□□□ -1.74
GABPAQ06546 AL355365.1-201ENST00000616480 294 ntBASIC4.18□□□□□ -1.74
GABPAQ06546 AC006249.1-201ENST00000621223 471 ntBASIC4.18□□□□□ -1.74
GABPAQ06546 U4.6-201ENST00000621618 127 ntBASIC4.18□□□□□ -1.74
GABPAQ06546 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
GABPAQ06546 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
GABPAQ06546 PHKBP1-201ENST00000450951 1951 ntBASIC4.18□□□□□ -1.74
GABPAQ06546 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.18□□□□□ -1.74
GABPAQ06546 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
GABPAQ06546 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.17□□□□□ -1.74
GABPAQ06546 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
GABPAQ06546 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
GABPAQ06546 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.17□□□□□ -1.74
GABPAQ06546 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
GABPAQ06546 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.17□□□□□ -1.74
GABPAQ06546 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
GABPAQ06546 RNA5SP50-201ENST00000363731 107 ntBASIC4.17□□□□□ -1.74
GABPAQ06546 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.17□□□□□ -1.74
GABPAQ06546 HSPE1P8-201ENST00000406997 288 ntBASIC4.17□□□□□ -1.74
GABPAQ06546 U3.39-201ENST00000408569 239 ntBASIC4.17□□□□□ -1.74
GABPAQ06546 RN7SKP111-201ENST00000410349 271 ntBASIC4.17□□□□□ -1.74
GABPAQ06546 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.17□□□□□ -1.74
GABPAQ06546 BX664727.1-201ENST00000416024 466 ntBASIC4.17□□□□□ -1.74
GABPAQ06546 AC234782.4-201ENST00000417646 1048 ntBASIC4.17□□□□□ -1.74
GABPAQ06546 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.17□□□□□ -1.74
GABPAQ06546 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.17□□□□□ -1.74
GABPAQ06546 MOB1AP1-201ENST00000430903 535 ntBASIC4.17□□□□□ -1.74
GABPAQ06546 AL035407.2-201ENST00000454090 378 ntBASIC4.17□□□□□ -1.74
GABPAQ06546 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.17□□□□□ -1.74
GABPAQ06546 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.17□□□□□ -1.74
GABPAQ06546 AC092902.1-201ENST00000486999 259 ntBASIC4.17□□□□□ -1.74
GABPAQ06546 AP000563.1-201ENST00000490865 758 ntBASIC4.17□□□□□ -1.74
GABPAQ06546 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.17□□□□□ -1.74
GABPAQ06546 AC008489.1-201ENST00000524271 483 ntBASIC4.17□□□□□ -1.74
GABPAQ06546 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.17□□□□□ -1.74
GABPAQ06546 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
GABPAQ06546 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.17□□□□□ -1.74
GABPAQ06546 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.17□□□□□ -1.74
GABPAQ06546 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.17□□□□□ -1.74
GABPAQ06546 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.17□□□□□ -1.74
GABPAQ06546 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.17□□□□□ -1.74
GABPAQ06546 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.17□□□□□ -1.74
GABPAQ06546 AC027104.1-201ENST00000563702 681 ntBASIC4.17□□□□□ -1.74
GABPAQ06546 MIR5186-201ENST00000577504 120 ntBASIC4.17□□□□□ -1.74
GABPAQ06546 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.17□□□□□ -1.74
GABPAQ06546 AL031985.2-201ENST00000600955 480 ntBASIC4.17□□□□□ -1.74
GABPAQ06546 AC125494.3-201ENST00000602759 455 ntBASIC4.17□□□□□ -1.74
GABPAQ06546 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
GABPAQ06546 AL159169.3-201ENST00000608871 561 ntBASIC4.17□□□□□ -1.74
GABPAQ06546 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.17□□□□□ -1.74
GABPAQ06546 AP003355.3-201ENST00000623465 114 ntBASIC4.17□□□□□ -1.74
GABPAQ06546 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.17□□□□□ -1.74
GABPAQ06546 AL590396.2-201ENST00000636511 1041 ntBASIC4.17□□□□□ -1.74
GABPAQ06546 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
GABPAQ06546 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
GABPAQ06546 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
GABPAQ06546 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
GABPAQ06546 AC114546.3-201ENST00000623582 1734 ntBASIC4.17□□□□□ -1.74
GABPAQ06546 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
GABPAQ06546 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
GABPAQ06546 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
GABPAQ06546 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
GABPAQ06546 HSPA8P19-201ENST00000505359 1517 ntBASIC4.16□□□□□ -1.74
GABPAQ06546 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
GABPAQ06546 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
GABPAQ06546 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
GABPAQ06546 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.16□□□□□ -1.74
GABPAQ06546 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
GABPAQ06546 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
GABPAQ06546 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
GABPAQ06546 RNU6-543P-201ENST00000362576 108 ntBASIC4.16□□□□□ -1.74
GABPAQ06546 MIR708-201ENST00000390708 88 ntBASIC4.16□□□□□ -1.74
GABPAQ06546 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.16□□□□□ -1.74
GABPAQ06546 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.16□□□□□ -1.74
GABPAQ06546 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.16□□□□□ -1.74
GABPAQ06546 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.16□□□□□ -1.74
GABPAQ06546 AL512637.2-201ENST00000431287 1256 ntBASIC4.16□□□□□ -1.74
GABPAQ06546 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.16□□□□□ -1.74
GABPAQ06546 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.16□□□□□ -1.74
GABPAQ06546 RPL37P3-201ENST00000456825 293 ntBASIC4.16□□□□□ -1.74
GABPAQ06546 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.16□□□□□ -1.74
GABPAQ06546 AC107016.1-201ENST00000550463 337 ntBASIC4.16□□□□□ -1.74
GABPAQ06546 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.16□□□□□ -1.74
GABPAQ06546 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.16□□□□□ -1.74
GABPAQ06546 AC090751.1-201ENST00000566966 267 ntBASIC4.16□□□□□ -1.74
GABPAQ06546 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.16□□□□□ -1.74
GABPAQ06546 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.16□□□□□ -1.74
GABPAQ06546 AP003117.1-201ENST00000602771 554 ntBASIC4.16□□□□□ -1.74
GABPAQ06546 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.16□□□□□ -1.74
GABPAQ06546 OR2BH1P-201ENST00000608850 864 ntBASIC4.16□□□□□ -1.74
GABPAQ06546 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.16□□□□□ -1.74
GABPAQ06546 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
GABPAQ06546 AC103858.2-201ENST00000621471 543 ntBASIC4.16□□□□□ -1.74
GABPAQ06546 MIR4727-201ENST00000622232 55 ntBASIC4.16□□□□□ -1.74
GABPAQ06546 AC024595.1-201ENST00000623088 387 ntBASIC4.16□□□□□ -1.74
GABPAQ06546 AP002371.2-201ENST00000624450 503 ntBASIC4.16□□□□□ -1.74
GABPAQ06546 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms