Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LSM6P62312 AC007823.1-201ENST00000569932 1566 ntBASIC3.09□□□□□ -1.91
LSM6P62312 SRP72P2-201ENST00000344851 1979 ntBASIC3.09□□□□□ -1.91
LSM6P62312 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
LSM6P62312 AL445189.1-201ENST00000405722 338 ntBASIC3.09□□□□□ -1.91
LSM6P62312 MIR1193-201ENST00000408109 78 ntBASIC3.09□□□□□ -1.91
LSM6P62312 RNU2-71P-201ENST00000411395 189 ntBASIC3.09□□□□□ -1.91
LSM6P62312 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.09□□□□□ -1.91
LSM6P62312 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
LSM6P62312 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.09□□□□□ -1.91
LSM6P62312 CYCSP4-201ENST00000429682 331 ntBASIC3.09□□□□□ -1.91
LSM6P62312 NDUFA5P10-201ENST00000432147 357 ntBASIC3.09□□□□□ -1.91
LSM6P62312 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LSM6P62312 RPS15AP29-201ENST00000445539 400 ntBASIC3.09□□□□□ -1.91
LSM6P62312 C1DP3-201ENST00000455013 423 ntBASIC3.09□□□□□ -1.91
LSM6P62312 AC007967.1-201ENST00000455422 1159 ntBASIC3.09□□□□□ -1.91
LSM6P62312 RPL7P15-201ENST00000461190 712 ntBASIC3.09□□□□□ -1.91
LSM6P62312 AP000563.1-201ENST00000490865 758 ntBASIC3.09□□□□□ -1.91
LSM6P62312 HMGB3P15-201ENST00000507326 574 ntBASIC3.09□□□□□ -1.91
LSM6P62312 AC010198.2-201ENST00000550612 259 ntBASIC3.09□□□□□ -1.91
LSM6P62312 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.09□□□□□ -1.91
LSM6P62312 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.09□□□□□ -1.91
LSM6P62312 MIR4474-201ENST00000579189 78 ntBASIC3.09□□□□□ -1.91
LSM6P62312 AC093227.2-201ENST00000589357 285 ntBASIC3.09□□□□□ -1.91
LSM6P62312 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LSM6P62312 AC005229.3-201ENST00000603438 323 ntBASIC3.09□□□□□ -1.91
LSM6P62312 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.09□□□□□ -1.91
LSM6P62312 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.09□□□□□ -1.91
LSM6P62312 AC119674.1-207ENST00000641355 633 ntBASIC3.09□□□□□ -1.91
LSM6P62312 AL079305.1-201ENST00000623159 3008 ntBASIC3.09□□□□□ -1.91
LSM6P62312 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.09□□□□□ -1.91
LSM6P62312 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
LSM6P62312 MTND4P31-201ENST00000425607 1343 ntBASIC3.09□□□□□ -1.91
LSM6P62312 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
LSM6P62312 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
LSM6P62312 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LSM6P62312 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LSM6P62312 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.08□□□□□ -1.92
LSM6P62312 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.08□□□□□ -1.92
LSM6P62312 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.08□□□□□ -1.92
LSM6P62312 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LSM6P62312 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.08□□□□□ -1.92
LSM6P62312 RNU6-600P-201ENST00000362524 99 ntBASIC3.08□□□□□ -1.92
LSM6P62312 SNORD3H-201ENST00000384486 214 ntBASIC3.08□□□□□ -1.92
LSM6P62312 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
LSM6P62312 HMGB3P18-201ENST00000406327 590 ntBASIC3.08□□□□□ -1.92
LSM6P62312 RN7SKP111-201ENST00000410349 271 ntBASIC3.08□□□□□ -1.92
LSM6P62312 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.08□□□□□ -1.92
LSM6P62312 AP000907.1-201ENST00000428428 510 ntBASIC3.08□□□□□ -1.92
LSM6P62312 PSMA2P3-201ENST00000429685 675 ntBASIC3.08□□□□□ -1.92
LSM6P62312 RRM2P4-201ENST00000441721 562 ntBASIC3.08□□□□□ -1.92
LSM6P62312 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.08□□□□□ -1.92
LSM6P62312 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.08□□□□□ -1.92
LSM6P62312 HMGN2P16-201ENST00000456802 261 ntBASIC3.08□□□□□ -1.92
LSM6P62312 U3.44-201ENST00000458938 192 ntBASIC3.08□□□□□ -1.92
LSM6P62312 AC096992.1-201ENST00000459808 709 ntBASIC3.08□□□□□ -1.92
LSM6P62312 RPL23AP67-201ENST00000465341 474 ntBASIC3.08□□□□□ -1.92
LSM6P62312 RPL6P9-201ENST00000466502 859 ntBASIC3.08□□□□□ -1.92
LSM6P62312 AC012181.1-201ENST00000479895 423 ntBASIC3.08□□□□□ -1.92
LSM6P62312 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.08□□□□□ -1.92
LSM6P62312 MTND4LP31-201ENST00000514859 294 ntBASIC3.08□□□□□ -1.92
LSM6P62312 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.08□□□□□ -1.92
LSM6P62312 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.08□□□□□ -1.92
LSM6P62312 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.08□□□□□ -1.92
LSM6P62312 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC3.08□□□□□ -1.92
LSM6P62312 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.08□□□□□ -1.92
LSM6P62312 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC3.08□□□□□ -1.92
LSM6P62312 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.08□□□□□ -1.92
LSM6P62312 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.08□□□□□ -1.92
LSM6P62312 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.08□□□□□ -1.92
LSM6P62312 AP004372.1-201ENST00000604842 844 ntBASIC3.08□□□□□ -1.92
LSM6P62312 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.08□□□□□ -1.92
LSM6P62312 FAM157B-203ENST00000639350 358 ntBASIC3.08□□□□□ -1.92
LSM6P62312 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LSM6P62312 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
LSM6P62312 MAPK10-362ENST00000641864 4484 ntBASIC3.08□□□□□ -1.92
LSM6P62312 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.08□□□□□ -1.92
LSM6P62312 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.08□□□□□ -1.92
LSM6P62312 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.08□□□□□ -1.92
LSM6P62312 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
LSM6P62312 AC022031.1-201ENST00000585985 2593 ntBASIC3.07□□□□□ -1.92
LSM6P62312 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.07□□□□□ -1.92
LSM6P62312 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
LSM6P62312 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.07□□□□□ -1.92
LSM6P62312 AC007496.3-201ENST00000624987 3443 ntBASIC3.07□□□□□ -1.92
LSM6P62312 FRG1CP-201ENST00000358464 769 ntBASIC3.07□□□□□ -1.92
LSM6P62312 RNA5SP391-201ENST00000363456 119 ntBASIC3.07□□□□□ -1.92
LSM6P62312 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
LSM6P62312 SNORA48.8-201ENST00000391324 134 ntBASIC3.07□□□□□ -1.92
LSM6P62312 AL355379.1-201ENST00000405542 640 ntBASIC3.07□□□□□ -1.92
LSM6P62312 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
LSM6P62312 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.07□□□□□ -1.92
LSM6P62312 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LSM6P62312 RPL17P36-201ENST00000420302 549 ntBASIC3.07□□□□□ -1.92
LSM6P62312 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.07□□□□□ -1.92
LSM6P62312 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.07□□□□□ -1.92
LSM6P62312 AL035246.1-201ENST00000433554 1255 ntBASIC3.07□□□□□ -1.92
LSM6P62312 AC007389.2-201ENST00000434630 306 ntBASIC3.07□□□□□ -1.92
LSM6P62312 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.07□□□□□ -1.92
LSM6P62312 AC073387.1-201ENST00000453261 709 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms