Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.14□□□□□ -1.59
RHBDL3P58872 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RHBDL3P58872 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.14□□□□□ -1.59
RHBDL3P58872 RNA5SP388-201ENST00000362584 119 ntBASIC5.14□□□□□ -1.59
RHBDL3P58872 RNU6-730P-201ENST00000383954 104 ntBASIC5.14□□□□□ -1.59
RHBDL3P58872 RNU6-1122P-201ENST00000384449 107 ntBASIC5.14□□□□□ -1.59
RHBDL3P58872 RNA5SP80-201ENST00000410475 111 ntBASIC5.14□□□□□ -1.59
RHBDL3P58872 RN7SKP33-201ENST00000410942 340 ntBASIC5.14□□□□□ -1.59
RHBDL3P58872 AL035410.1-201ENST00000427409 427 ntBASIC5.14□□□□□ -1.59
RHBDL3P58872 AC092427.1-201ENST00000439177 601 ntBASIC5.14□□□□□ -1.59
RHBDL3P58872 CR769776.1-201ENST00000441254 787 ntBASIC5.14□□□□□ -1.59
RHBDL3P58872 PTENP1-201ENST00000447117 1215 ntBASIC5.14□□□□□ -1.59
RHBDL3P58872 OFD1P3Y-201ENST00000453312 783 ntBASIC5.14□□□□□ -1.59
RHBDL3P58872 AC133473.1-201ENST00000455173 299 ntBASIC5.14□□□□□ -1.59
RHBDL3P58872 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
RHBDL3P58872 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.14□□□□□ -1.59
RHBDL3P58872 RPL5P23-201ENST00000496040 868 ntBASIC5.14□□□□□ -1.59
RHBDL3P58872 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.14□□□□□ -1.59
RHBDL3P58872 WBP1LP4-201ENST00000505043 344 ntBASIC5.14□□□□□ -1.59
RHBDL3P58872 AL592156.1-201ENST00000508758 304 ntBASIC5.14□□□□□ -1.59
RHBDL3P58872 AC008837.2-201ENST00000513076 418 ntBASIC5.14□□□□□ -1.59
RHBDL3P58872 RN7SKP31-201ENST00000516354 278 ntBASIC5.14□□□□□ -1.59
RHBDL3P58872 RNA5SP73-201ENST00000516744 108 ntBASIC5.14□□□□□ -1.59
RHBDL3P58872 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.14□□□□□ -1.59
RHBDL3P58872 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.14□□□□□ -1.59
RHBDL3P58872 SLC2A13P1-201ENST00000531560 322 ntBASIC5.14□□□□□ -1.59
RHBDL3P58872 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.14□□□□□ -1.59
RHBDL3P58872 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.14□□□□□ -1.59
RHBDL3P58872 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.14□□□□□ -1.59
RHBDL3P58872 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.14□□□□□ -1.59
RHBDL3P58872 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.14□□□□□ -1.59
RHBDL3P58872 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.14□□□□□ -1.59
RHBDL3P58872 MTND4P33-201ENST00000556706 766 ntBASIC5.14□□□□□ -1.59
RHBDL3P58872 TVP23BP1-201ENST00000557500 617 ntBASIC5.14□□□□□ -1.59
RHBDL3P58872 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.14□□□□□ -1.59
RHBDL3P58872 RN7SL435P-201ENST00000584418 282 ntBASIC5.14□□□□□ -1.59
RHBDL3P58872 AC005255.1-201ENST00000593748 216 ntBASIC5.14□□□□□ -1.59
RHBDL3P58872 RPL23AP92-201ENST00000603609 255 ntBASIC5.14□□□□□ -1.59
RHBDL3P58872 MTND3P19-201ENST00000603825 345 ntBASIC5.14□□□□□ -1.59
RHBDL3P58872 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.14□□□□□ -1.59
RHBDL3P58872 Z98200.1-201ENST00000607298 470 ntBASIC5.14□□□□□ -1.59
RHBDL3P58872 CYP3A51P-201ENST00000633513 256 ntBASIC5.14□□□□□ -1.59
RHBDL3P58872 AC008013.2-202ENST00000637965 364 ntBASIC5.14□□□□□ -1.59
RHBDL3P58872 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RHBDL3P58872 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RHBDL3P58872 NEAT1-202ENST00000501122 22743 ntBASIC5.14□□□□□ -1.59
RHBDL3P58872 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
RHBDL3P58872 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
RHBDL3P58872 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
RHBDL3P58872 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RHBDL3P58872 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RHBDL3P58872 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RHBDL3P58872 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RHBDL3P58872 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RHBDL3P58872 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RHBDL3P58872 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RHBDL3P58872 RNU6-657P-201ENST00000383904 107 ntBASIC5.13□□□□□ -1.59
RHBDL3P58872 SLC9B1P2-201ENST00000398120 1184 ntBASIC5.13□□□□□ -1.59
RHBDL3P58872 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.13□□□□□ -1.59
RHBDL3P58872 SSR1P2-201ENST00000415208 787 ntBASIC5.13□□□□□ -1.59
RHBDL3P58872 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.13□□□□□ -1.59
RHBDL3P58872 USP9YP7-201ENST00000436723 430 ntBASIC5.13□□□□□ -1.59
RHBDL3P58872 RPL23AP74-201ENST00000437246 471 ntBASIC5.13□□□□□ -1.59
RHBDL3P58872 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.13□□□□□ -1.59
RHBDL3P58872 AC122718.1-201ENST00000439448 744 ntBASIC5.13□□□□□ -1.59
RHBDL3P58872 HSFY6P-201ENST00000445573 403 ntBASIC5.13□□□□□ -1.59
RHBDL3P58872 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.13□□□□□ -1.59
RHBDL3P58872 SLC31A1P1-201ENST00000451221 567 ntBASIC5.13□□□□□ -1.59
RHBDL3P58872 USP9YP32-201ENST00000452432 430 ntBASIC5.13□□□□□ -1.59
RHBDL3P58872 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.13□□□□□ -1.59
RHBDL3P58872 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RHBDL3P58872 AL445433.1-201ENST00000457507 257 ntBASIC5.13□□□□□ -1.59
RHBDL3P58872 FAM133DP-201ENST00000464802 691 ntBASIC5.13□□□□□ -1.59
RHBDL3P58872 PABPC1P3-201ENST00000469174 459 ntBASIC5.13□□□□□ -1.59
RHBDL3P58872 SYPL1P1-201ENST00000473622 768 ntBASIC5.13□□□□□ -1.59
RHBDL3P58872 ACTG1P13-201ENST00000486987 1043 ntBASIC5.13□□□□□ -1.59
RHBDL3P58872 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.13□□□□□ -1.59
RHBDL3P58872 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.13□□□□□ -1.59
RHBDL3P58872 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.13□□□□□ -1.59
RHBDL3P58872 AC099522.1-202ENST00000514718 367 ntBASIC5.13□□□□□ -1.59
RHBDL3P58872 MIR2116-201ENST00000517221 80 ntBASIC5.13□□□□□ -1.59
RHBDL3P58872 AC134698.5-201ENST00000519444 336 ntBASIC5.13□□□□□ -1.59
RHBDL3P58872 AP001636.2-201ENST00000525517 696 ntBASIC5.13□□□□□ -1.59
RHBDL3P58872 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RHBDL3P58872 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RHBDL3P58872 AC106785.1-201ENST00000565935 262 ntBASIC5.13□□□□□ -1.59
RHBDL3P58872 BNIP3P24-201ENST00000593398 557 ntBASIC5.13□□□□□ -1.59
RHBDL3P58872 AP002782.1-201ENST00000623107 614 ntBASIC5.13□□□□□ -1.59
RHBDL3P58872 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.13□□□□□ -1.59
RHBDL3P58872 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.13□□□□□ -1.59
RHBDL3P58872 AC008725.1-201ENST00000605123 2263 ntBASIC5.13□□□□□ -1.59
RHBDL3P58872 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RHBDL3P58872 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RHBDL3P58872 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
RHBDL3P58872 AL022322.2-201ENST00000624072 20397 ntBASIC5.13□□□□□ -1.59
RHBDL3P58872 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RHBDL3P58872 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.13□□□□□ -1.59
RHBDL3P58872 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RHBDL3P58872 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
RHBDL3P58872 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms