Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AL138878.1-201ENST00000405131 347 ntBASIC3.99□□□□□ -1.77
PEX3P56589 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.99□□□□□ -1.77
PEX3P56589 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.99□□□□□ -1.77
PEX3P56589 SEC63P1-201ENST00000425785 1258 ntBASIC3.99□□□□□ -1.77
PEX3P56589 RPS26P47-201ENST00000427219 348 ntBASIC3.99□□□□□ -1.77
PEX3P56589 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PEX3P56589 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.99□□□□□ -1.77
PEX3P56589 FCF1P6-201ENST00000456841 595 ntBASIC3.99□□□□□ -1.77
PEX3P56589 RPL23AP12-201ENST00000467573 473 ntBASIC3.99□□□□□ -1.77
PEX3P56589 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.99□□□□□ -1.77
PEX3P56589 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.99□□□□□ -1.77
PEX3P56589 AC068305.1-201ENST00000497406 726 ntBASIC3.99□□□□□ -1.77
PEX3P56589 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.99□□□□□ -1.77
PEX3P56589 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.99□□□□□ -1.77
PEX3P56589 AC026403.1-201ENST00000518938 295 ntBASIC3.99□□□□□ -1.77
PEX3P56589 RANP9-201ENST00000519957 271 ntBASIC3.99□□□□□ -1.77
PEX3P56589 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.99□□□□□ -1.77
PEX3P56589 AL133457.1-201ENST00000564251 987 ntBASIC3.99□□□□□ -1.77
PEX3P56589 KLKP1-201ENST00000595979 403 ntBASIC3.99□□□□□ -1.77
PEX3P56589 AC010591.1-201ENST00000603941 649 ntBASIC3.99□□□□□ -1.77
PEX3P56589 AL139022.2-201ENST00000606934 443 ntBASIC3.99□□□□□ -1.77
PEX3P56589 AC017076.1-201ENST00000607613 578 ntBASIC3.99□□□□□ -1.77
PEX3P56589 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.99□□□□□ -1.77
PEX3P56589 AL391834.2-201ENST00000609982 546 ntBASIC3.99□□□□□ -1.77
PEX3P56589 AC073569.3-201ENST00000619055 682 ntBASIC3.99□□□□□ -1.77
PEX3P56589 AC112200.1-201ENST00000625015 234 ntBASIC3.99□□□□□ -1.77
PEX3P56589 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.99□□□□□ -1.77
PEX3P56589 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.99□□□□□ -1.77
PEX3P56589 AC096656.1-201ENST00000623826 1364 ntBASIC3.99□□□□□ -1.77
PEX3P56589 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.99□□□□□ -1.77
PEX3P56589 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.98□□□□□ -1.77
PEX3P56589 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PEX3P56589 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PEX3P56589 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PEX3P56589 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PEX3P56589 XIAPP3-201ENST00000312918 795 ntBASIC3.98□□□□□ -1.77
PEX3P56589 AC011155.1-201ENST00000316512 456 ntBASIC3.98□□□□□ -1.77
PEX3P56589 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
PEX3P56589 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
PEX3P56589 RNA5SP27-201ENST00000363839 119 ntBASIC3.98□□□□□ -1.77
PEX3P56589 SNORA48.7-201ENST00000391302 135 ntBASIC3.98□□□□□ -1.77
PEX3P56589 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.98□□□□□ -1.77
PEX3P56589 AL355615.1-201ENST00000406187 641 ntBASIC3.98□□□□□ -1.77
PEX3P56589 MTHFD2P2-201ENST00000407725 247 ntBASIC3.98□□□□□ -1.77
PEX3P56589 Z98941.1-201ENST00000407764 100 ntBASIC3.98□□□□□ -1.77
PEX3P56589 RN7SKP56-201ENST00000410513 331 ntBASIC3.98□□□□□ -1.77
PEX3P56589 RNU2-6P-201ENST00000411404 190 ntBASIC3.98□□□□□ -1.77
PEX3P56589 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.98□□□□□ -1.77
PEX3P56589 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PEX3P56589 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.98□□□□□ -1.77
PEX3P56589 MOB1AP1-201ENST00000430903 535 ntBASIC3.98□□□□□ -1.77
PEX3P56589 AC091286.1-201ENST00000431233 461 ntBASIC3.98□□□□□ -1.77
PEX3P56589 RPS24P8-201ENST00000431490 402 ntBASIC3.98□□□□□ -1.77
PEX3P56589 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.98□□□□□ -1.77
PEX3P56589 AC000041.1-201ENST00000439655 175 ntBASIC3.98□□□□□ -1.77
PEX3P56589 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.98□□□□□ -1.77
PEX3P56589 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.98□□□□□ -1.77
PEX3P56589 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.98□□□□□ -1.77
PEX3P56589 AL096803.2-201ENST00000450032 677 ntBASIC3.98□□□□□ -1.77
PEX3P56589 MTATP6P14-201ENST00000455189 673 ntBASIC3.98□□□□□ -1.77
PEX3P56589 RN7SL93P-201ENST00000463035 293 ntBASIC3.98□□□□□ -1.77
PEX3P56589 AC091564.1-201ENST00000464563 479 ntBASIC3.98□□□□□ -1.77
PEX3P56589 AC106707.2-201ENST00000484182 374 ntBASIC3.98□□□□□ -1.77
PEX3P56589 HMGB1P38-201ENST00000490557 577 ntBASIC3.98□□□□□ -1.77
PEX3P56589 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PEX3P56589 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.98□□□□□ -1.77
PEX3P56589 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PEX3P56589 MTATP6P9-201ENST00000515039 680 ntBASIC3.98□□□□□ -1.77
PEX3P56589 SNORA70.18-201ENST00000516696 98 ntBASIC3.98□□□□□ -1.77
PEX3P56589 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.98□□□□□ -1.77
PEX3P56589 AC083923.1-201ENST00000523708 376 ntBASIC3.98□□□□□ -1.77
PEX3P56589 CBX3P5-201ENST00000552017 521 ntBASIC3.98□□□□□ -1.77
PEX3P56589 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.98□□□□□ -1.77
PEX3P56589 AC023825.1-201ENST00000566704 1030 ntBASIC3.98□□□□□ -1.77
PEX3P56589 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.98□□□□□ -1.77
PEX3P56589 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.98□□□□□ -1.77
PEX3P56589 AC011458.1-201ENST00000604034 617 ntBASIC3.98□□□□□ -1.77
PEX3P56589 AC006077.1-201ENST00000604746 343 ntBASIC3.98□□□□□ -1.77
PEX3P56589 AC096586.1-201ENST00000610267 561 ntBASIC3.98□□□□□ -1.77
PEX3P56589 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.98□□□□□ -1.77
PEX3P56589 AC243654.2-201ENST00000612843 443 ntBASIC3.98□□□□□ -1.77
PEX3P56589 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.98□□□□□ -1.77
PEX3P56589 STMN1P1-201ENST00000617809 440 ntBASIC3.98□□□□□ -1.77
PEX3P56589 AC139769.3-201ENST00000618383 175 ntBASIC3.98□□□□□ -1.77
PEX3P56589 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.98□□□□□ -1.77
PEX3P56589 AC132825.7-201ENST00000638744 335 ntBASIC3.98□□□□□ -1.77
PEX3P56589 AC009093.8-201ENST00000641769 292 ntBASIC3.98□□□□□ -1.77
PEX3P56589 AL732372.2-225ENST00000642124 456 ntBASIC3.98□□□□□ -1.77
PEX3P56589 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PEX3P56589 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PEX3P56589 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.98□□□□□ -1.77
PEX3P56589 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.97□□□□□ -1.77
PEX3P56589 ZNF849P-201ENST00000594711 1566 ntBASIC3.97□□□□□ -1.77
PEX3P56589 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.97□□□□□ -1.77
PEX3P56589 AL645568.2-201ENST00000432815 1337 ntBASIC3.97□□□□□ -1.77
PEX3P56589 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PEX3P56589 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PEX3P56589 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.97□□□□□ -1.77
PEX3P56589 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.97□□□□□ -1.77
PEX3P56589 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms