Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 SNORD108-201ENST00000459332 71 ntBASIC3.34□□□□□ -1.87
CDKN2DP55273 AC020898.1-201ENST00000474167 787 ntBASIC3.34□□□□□ -1.87
CDKN2DP55273 AP001086.1-201ENST00000494882 321 ntBASIC3.34□□□□□ -1.87
CDKN2DP55273 HMGB1P21-201ENST00000502313 581 ntBASIC3.34□□□□□ -1.87
CDKN2DP55273 AC112198.1-201ENST00000505369 1220 ntBASIC3.34□□□□□ -1.87
CDKN2DP55273 HMGN1P15-201ENST00000513870 295 ntBASIC3.34□□□□□ -1.87
CDKN2DP55273 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.34□□□□□ -1.87
CDKN2DP55273 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.34□□□□□ -1.87
CDKN2DP55273 OR4R3P-201ENST00000525084 838 ntBASIC3.34□□□□□ -1.87
CDKN2DP55273 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDKN2DP55273 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.34□□□□□ -1.87
CDKN2DP55273 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.34□□□□□ -1.87
CDKN2DP55273 AL121594.4-201ENST00000556211 1196 ntBASIC3.34□□□□□ -1.87
CDKN2DP55273 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.34□□□□□ -1.87
CDKN2DP55273 MTND4LP24-201ENST00000572277 291 ntBASIC3.34□□□□□ -1.87
CDKN2DP55273 MIR5047-201ENST00000579212 100 ntBASIC3.34□□□□□ -1.87
CDKN2DP55273 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
CDKN2DP55273 AP001180.3-201ENST00000582221 145 ntBASIC3.34□□□□□ -1.87
CDKN2DP55273 AC008507.1-201ENST00000587506 734 ntBASIC3.34□□□□□ -1.87
CDKN2DP55273 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.34□□□□□ -1.87
CDKN2DP55273 AL356863.1-201ENST00000623378 1080 ntBASIC3.34□□□□□ -1.87
CDKN2DP55273 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CDKN2DP55273 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
CDKN2DP55273 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CDKN2DP55273 GTF2H2B-203ENST00000508065 1432 ntBASIC3.34□□□□□ -1.88
CDKN2DP55273 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CDKN2DP55273 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CDKN2DP55273 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CDKN2DP55273 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CDKN2DP55273 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
CDKN2DP55273 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
CDKN2DP55273 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.33□□□□□ -1.88
CDKN2DP55273 USP8P1-201ENST00000494673 3183 ntBASIC3.33□□□□□ -1.88
CDKN2DP55273 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDKN2DP55273 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.33□□□□□ -1.88
CDKN2DP55273 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDKN2DP55273 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDKN2DP55273 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.33□□□□□ -1.88
CDKN2DP55273 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.33□□□□□ -1.88
CDKN2DP55273 MTND4LP14-201ENST00000429447 288 ntBASIC3.33□□□□□ -1.88
CDKN2DP55273 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.33□□□□□ -1.88
CDKN2DP55273 ZNF965P-201ENST00000432501 817 ntBASIC3.33□□□□□ -1.88
CDKN2DP55273 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.33□□□□□ -1.88
CDKN2DP55273 AL031663.1-201ENST00000437445 219 ntBASIC3.33□□□□□ -1.88
CDKN2DP55273 AL513343.1-201ENST00000451818 792 ntBASIC3.33□□□□□ -1.88
CDKN2DP55273 AC087312.1-201ENST00000471411 480 ntBASIC3.33□□□□□ -1.88
CDKN2DP55273 CYCSP20-201ENST00000473154 315 ntBASIC3.33□□□□□ -1.88
CDKN2DP55273 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.33□□□□□ -1.88
CDKN2DP55273 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.33□□□□□ -1.88
CDKN2DP55273 RNU6-362P-201ENST00000516736 90 ntBASIC3.33□□□□□ -1.88
CDKN2DP55273 PAICSP4-201ENST00000517543 1253 ntBASIC3.33□□□□□ -1.88
CDKN2DP55273 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.33□□□□□ -1.88
CDKN2DP55273 AC026616.1-201ENST00000523157 525 ntBASIC3.33□□□□□ -1.88
CDKN2DP55273 BNIP3P5-201ENST00000562290 498 ntBASIC3.33□□□□□ -1.88
CDKN2DP55273 AC005242.1-201ENST00000585658 438 ntBASIC3.33□□□□□ -1.88
CDKN2DP55273 AC093227.2-201ENST00000589357 285 ntBASIC3.33□□□□□ -1.88
CDKN2DP55273 AC006557.5-201ENST00000603126 811 ntBASIC3.33□□□□□ -1.88
CDKN2DP55273 SUMO2P14-201ENST00000604488 293 ntBASIC3.33□□□□□ -1.88
CDKN2DP55273 AC110792.4-201ENST00000609843 298 ntBASIC3.33□□□□□ -1.88
CDKN2DP55273 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.33□□□□□ -1.88
CDKN2DP55273 AL162233.1-201ENST00000620014 944 ntBASIC3.33□□□□□ -1.88
CDKN2DP55273 AC243312.2-201ENST00000623340 601 ntBASIC3.33□□□□□ -1.88
CDKN2DP55273 CR392039.4-201ENST00000624968 501 ntBASIC3.33□□□□□ -1.88
CDKN2DP55273 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CDKN2DP55273 AC009501.3-201ENST00000605001 1352 ntBASIC3.33□□□□□ -1.88
CDKN2DP55273 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.33□□□□□ -1.88
CDKN2DP55273 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDKN2DP55273 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
CDKN2DP55273 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDKN2DP55273 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDKN2DP55273 AC017071.1-201ENST00000564407 2204 ntBASIC3.32□□□□□ -1.88
CDKN2DP55273 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.32□□□□□ -1.88
CDKN2DP55273 MIR554-201ENST00000384874 96 ntBASIC3.32□□□□□ -1.88
CDKN2DP55273 PTMAP5-201ENST00000393073 333 ntBASIC3.32□□□□□ -1.88
CDKN2DP55273 NPM1P10-201ENST00000398310 865 ntBASIC3.32□□□□□ -1.88
CDKN2DP55273 RN7SKP111-201ENST00000410349 271 ntBASIC3.32□□□□□ -1.88
CDKN2DP55273 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.32□□□□□ -1.88
CDKN2DP55273 MTND4P24-201ENST00000424002 397 ntBASIC3.32□□□□□ -1.88
CDKN2DP55273 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.32□□□□□ -1.88
CDKN2DP55273 AC092641.1-201ENST00000440229 772 ntBASIC3.32□□□□□ -1.88
CDKN2DP55273 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.32□□□□□ -1.88
CDKN2DP55273 TPMTP4-201ENST00000450749 678 ntBASIC3.32□□□□□ -1.88
CDKN2DP55273 RPL26P28-201ENST00000451325 435 ntBASIC3.32□□□□□ -1.88
CDKN2DP55273 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.32□□□□□ -1.88
CDKN2DP55273 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDKN2DP55273 OR5H4P-201ENST00000510851 923 ntBASIC3.32□□□□□ -1.88
CDKN2DP55273 AC010285.3-201ENST00000511668 676 ntBASIC3.32□□□□□ -1.88
CDKN2DP55273 FABP5P12-201ENST00000515543 389 ntBASIC3.32□□□□□ -1.88
CDKN2DP55273 RN7SKP82-201ENST00000516786 223 ntBASIC3.32□□□□□ -1.88
CDKN2DP55273 AC023632.4-201ENST00000517783 191 ntBASIC3.32□□□□□ -1.88
CDKN2DP55273 AC026403.1-201ENST00000518938 295 ntBASIC3.32□□□□□ -1.88
CDKN2DP55273 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.32□□□□□ -1.88
CDKN2DP55273 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.32□□□□□ -1.88
CDKN2DP55273 OR5B10P-201ENST00000532869 642 ntBASIC3.32□□□□□ -1.88
CDKN2DP55273 OR4U1P-201ENST00000554958 912 ntBASIC3.32□□□□□ -1.88
CDKN2DP55273 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDKN2DP55273 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.32□□□□□ -1.88
CDKN2DP55273 AC115085.1-201ENST00000588924 229 ntBASIC3.32□□□□□ -1.88
CDKN2DP55273 AC004775.1-201ENST00000607389 753 ntBASIC3.32□□□□□ -1.88
CDKN2DP55273 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms