Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VCPP55072 MAPK10-372ENST00000641954 3413 ntBASIC4.12□□□□□ -1.75
VCPP55072 RNA5SP399-201ENST00000364003 117 ntBASIC4.12□□□□□ -1.75
VCPP55072 RNU1-89P-201ENST00000384592 164 ntBASIC4.12□□□□□ -1.75
VCPP55072 TATDN1P1-201ENST00000414123 891 ntBASIC4.12□□□□□ -1.75
VCPP55072 RPL31P45-201ENST00000419532 356 ntBASIC4.12□□□□□ -1.75
VCPP55072 AL035423.1-201ENST00000420331 213 ntBASIC4.12□□□□□ -1.75
VCPP55072 AC093698.1-201ENST00000423843 571 ntBASIC4.12□□□□□ -1.75
VCPP55072 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.12□□□□□ -1.75
VCPP55072 HMGB1P37-201ENST00000439613 609 ntBASIC4.12□□□□□ -1.75
VCPP55072 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.12□□□□□ -1.75
VCPP55072 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.12□□□□□ -1.75
VCPP55072 CYCSP35-201ENST00000451978 304 ntBASIC4.12□□□□□ -1.75
VCPP55072 AP000873.1-201ENST00000463987 400 ntBASIC4.12□□□□□ -1.75
VCPP55072 UBE2DNL-203ENST00000474922 222 ntBASIC4.12□□□□□ -1.75
VCPP55072 HMGN1P15-201ENST00000513870 295 ntBASIC4.12□□□□□ -1.75
VCPP55072 AC010342.1-201ENST00000514047 877 ntBASIC4.12□□□□□ -1.75
VCPP55072 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.12□□□□□ -1.75
VCPP55072 OSBPL9P3-201ENST00000534523 595 ntBASIC4.12□□□□□ -1.75
VCPP55072 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.12□□□□□ -1.75
VCPP55072 AL109741.3-201ENST00000561748 592 ntBASIC4.12□□□□□ -1.75
VCPP55072 MIR4644-201ENST00000579929 84 ntBASIC4.12□□□□□ -1.75
VCPP55072 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.12□□□□□ -1.75
VCPP55072 AC005344.1-201ENST00000613391 459 ntBASIC4.12□□□□□ -1.75
VCPP55072 AL591424.2-201ENST00000617023 128 ntBASIC4.12□□□□□ -1.75
VCPP55072 AC073530.2-201ENST00000623987 261 ntBASIC4.12□□□□□ -1.75
VCPP55072 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.12□□□□□ -1.75
VCPP55072 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.12□□□□□ -1.75
VCPP55072 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VCPP55072 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
VCPP55072 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
VCPP55072 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.12□□□□□ -1.75
VCPP55072 AP004289.2-201ENST00000444413 1457 ntBASIC4.11□□□□□ -1.75
VCPP55072 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.11□□□□□ -1.75
VCPP55072 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
VCPP55072 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
VCPP55072 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
VCPP55072 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
VCPP55072 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.11□□□□□ -1.75
VCPP55072 RNU6-252P-201ENST00000363232 107 ntBASIC4.11□□□□□ -1.75
VCPP55072 RNA5SP391-201ENST00000363456 119 ntBASIC4.11□□□□□ -1.75
VCPP55072 RNA5SP267-201ENST00000364893 126 ntBASIC4.11□□□□□ -1.75
VCPP55072 MIR153-1-201ENST00000384914 90 ntBASIC4.11□□□□□ -1.75
VCPP55072 PTGES3P2-201ENST00000407942 482 ntBASIC4.11□□□□□ -1.75
VCPP55072 AMD1P2-201ENST00000412936 992 ntBASIC4.11□□□□□ -1.75
VCPP55072 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.11□□□□□ -1.75
VCPP55072 AL035458.1-201ENST00000433096 585 ntBASIC4.11□□□□□ -1.75
VCPP55072 AC083863.1-201ENST00000438811 231 ntBASIC4.11□□□□□ -1.75
VCPP55072 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.11□□□□□ -1.75
VCPP55072 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.11□□□□□ -1.75
VCPP55072 RPL37P6-202ENST00000464216 403 ntBASIC4.11□□□□□ -1.75
VCPP55072 AC106707.2-201ENST00000484182 374 ntBASIC4.11□□□□□ -1.75
VCPP55072 UBE2CP3-201ENST00000502715 450 ntBASIC4.11□□□□□ -1.75
VCPP55072 SNX5P1-201ENST00000505757 1041 ntBASIC4.11□□□□□ -1.75
VCPP55072 SNORA31.13-201ENST00000516624 135 ntBASIC4.11□□□□□ -1.75
VCPP55072 IGKV2D-23-201ENST00000518179 286 ntBASIC4.11□□□□□ -1.75
VCPP55072 AC007991.1-201ENST00000522680 631 ntBASIC4.11□□□□□ -1.75
VCPP55072 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.11□□□□□ -1.75
VCPP55072 MTND4LP25-201ENST00000570218 163 ntBASIC4.11□□□□□ -1.75
VCPP55072 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.11□□□□□ -1.75
VCPP55072 LLPHP1-201ENST00000603571 367 ntBASIC4.11□□□□□ -1.75
VCPP55072 AC110741.2-201ENST00000605278 268 ntBASIC4.11□□□□□ -1.75
VCPP55072 AC113194.1-201ENST00000606037 500 ntBASIC4.11□□□□□ -1.75
VCPP55072 MIR486-1-201ENST00000612171 68 ntBASIC4.11□□□□□ -1.75
VCPP55072 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
VCPP55072 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.11□□□□□ -1.75
VCPP55072 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.11□□□□□ -1.75
VCPP55072 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.11□□□□□ -1.75
VCPP55072 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.11□□□□□ -1.75
VCPP55072 OR6C71P-202ENST00000641886 1107 ntBASIC4.11□□□□□ -1.75
VCPP55072 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.11□□□□□ -1.75
VCPP55072 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VCPP55072 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
VCPP55072 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
VCPP55072 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
VCPP55072 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VCPP55072 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VCPP55072 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
VCPP55072 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VCPP55072 RNU6-792P-201ENST00000363490 107 ntBASIC4.1□□□□□ -1.75
VCPP55072 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VCPP55072 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
VCPP55072 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
VCPP55072 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VCPP55072 AC007066.1-201ENST00000392902 381 ntBASIC4.1□□□□□ -1.75
VCPP55072 HNRNPDP2-201ENST00000406475 478 ntBASIC4.1□□□□□ -1.75
VCPP55072 RN7SKP56-201ENST00000410513 331 ntBASIC4.1□□□□□ -1.75
VCPP55072 RPL7AP73-201ENST00000413490 353 ntBASIC4.1□□□□□ -1.75
VCPP55072 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.1□□□□□ -1.75
VCPP55072 AC023347.2-201ENST00000433994 462 ntBASIC4.1□□□□□ -1.75
VCPP55072 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.1□□□□□ -1.75
VCPP55072 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VCPP55072 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VCPP55072 ANP32BP2-201ENST00000454525 545 ntBASIC4.1□□□□□ -1.75
VCPP55072 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.1□□□□□ -1.75
VCPP55072 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.1□□□□□ -1.75
VCPP55072 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.1□□□□□ -1.75
VCPP55072 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.1□□□□□ -1.75
VCPP55072 SNORA70.14-201ENST00000516205 110 ntBASIC4.1□□□□□ -1.75
VCPP55072 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms