Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.35□□□□□ -1.55
SMARCA4P51532 AL365400.2-201ENST00000605604 902 ntBASIC5.35□□□□□ -1.55
SMARCA4P51532 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.35□□□□□ -1.55
SMARCA4P51532 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SMARCA4P51532 AC007336.1-201ENST00000576365 3828 ntBASIC5.35□□□□□ -1.55
SMARCA4P51532 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC5.35□□□□□ -1.55
SMARCA4P51532 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.35□□□□□ -1.55
SMARCA4P51532 AC020633.1-201ENST00000468439 2247 ntBASIC5.35□□□□□ -1.55
SMARCA4P51532 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SMARCA4P51532 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
SMARCA4P51532 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SMARCA4P51532 AL356057.1-202ENST00000402263 756 ntBASIC5.34□□□□□ -1.55
SMARCA4P51532 RNA5SP31-201ENST00000411144 127 ntBASIC5.34□□□□□ -1.55
SMARCA4P51532 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC5.34□□□□□ -1.55
SMARCA4P51532 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.34□□□□□ -1.55
SMARCA4P51532 FTH1P1-201ENST00000437933 532 ntBASIC5.34□□□□□ -1.55
SMARCA4P51532 HMGB3P11-201ENST00000440127 604 ntBASIC5.34□□□□□ -1.55
SMARCA4P51532 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.34□□□□□ -1.55
SMARCA4P51532 NIPA2P5-201ENST00000452282 464 ntBASIC5.34□□□□□ -1.55
SMARCA4P51532 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.34□□□□□ -1.55
SMARCA4P51532 AC114781.4-201ENST00000513707 639 ntBASIC5.34□□□□□ -1.55
SMARCA4P51532 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.34□□□□□ -1.55
SMARCA4P51532 AC234778.2-201ENST00000566241 354 ntBASIC5.34□□□□□ -1.55
SMARCA4P51532 MIR5047-201ENST00000579212 100 ntBASIC5.34□□□□□ -1.55
SMARCA4P51532 AL359715.5-201ENST00000623431 443 ntBASIC5.34□□□□□ -1.55
SMARCA4P51532 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC5.34□□□□□ -1.55
SMARCA4P51532 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SMARCA4P51532 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SMARCA4P51532 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SMARCA4P51532 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
SMARCA4P51532 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
SMARCA4P51532 RNU6-851P-201ENST00000384565 107 ntBASIC5.34□□□□□ -1.56
SMARCA4P51532 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.34□□□□□ -1.56
SMARCA4P51532 NPM1P24-201ENST00000428039 894 ntBASIC5.34□□□□□ -1.56
SMARCA4P51532 RPL31P13-201ENST00000484151 370 ntBASIC5.34□□□□□ -1.56
SMARCA4P51532 AC114967.1-201ENST00000504890 259 ntBASIC5.34□□□□□ -1.56
SMARCA4P51532 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.34□□□□□ -1.56
SMARCA4P51532 AC138761.3-201ENST00000579993 334 ntBASIC5.34□□□□□ -1.56
SMARCA4P51532 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
SMARCA4P51532 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SMARCA4P51532 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SMARCA4P51532 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SMARCA4P51532 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SMARCA4P51532 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SMARCA4P51532 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.33□□□□□ -1.56
SMARCA4P51532 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SMARCA4P51532 PLCE1P1-201ENST00000622094 305 ntBASIC5.33□□□□□ -1.56
SMARCA4P51532 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC5.33□□□□□ -1.56
SMARCA4P51532 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.32□□□□□ -1.56
SMARCA4P51532 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SMARCA4P51532 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.32□□□□□ -1.56
SMARCA4P51532 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SMARCA4P51532 AL672167.1-206ENST00000356293 943 ntBASIC5.32□□□□□ -1.56
SMARCA4P51532 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SMARCA4P51532 SETP15-201ENST00000412724 337 ntBASIC5.32□□□□□ -1.56
SMARCA4P51532 ARL5AP4-201ENST00000430731 512 ntBASIC5.32□□□□□ -1.56
SMARCA4P51532 APOA2-205ENST00000468465 421 ntTSL 2 BASIC5.32□□□□□ -1.56
SMARCA4P51532 RN7SL20P-201ENST00000488827 297 ntBASIC5.32□□□□□ -1.56
SMARCA4P51532 OR6R2P-201ENST00000609216 300 ntBASIC5.32□□□□□ -1.56
SMARCA4P51532 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SMARCA4P51532 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
SMARCA4P51532 RNU2-52P-201ENST00000410680 190 ntBASIC5.31□□□□□ -1.56
SMARCA4P51532 MRPL50P2-201ENST00000416821 482 ntBASIC5.31□□□□□ -1.56
SMARCA4P51532 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.31□□□□□ -1.56
SMARCA4P51532 AC109329.2-201ENST00000519658 482 ntBASIC5.31□□□□□ -1.56
SMARCA4P51532 MIR4435-1-201ENST00000582552 80 ntBASIC5.31□□□□□ -1.56
SMARCA4P51532 AC096947.1-201ENST00000603233 470 ntBASIC5.31□□□□□ -1.56
SMARCA4P51532 AC091903.1-201ENST00000624322 454 ntBASIC5.31□□□□□ -1.56
SMARCA4P51532 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SMARCA4P51532 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SMARCA4P51532 AL022311.1-201ENST00000623726 19416 ntBASIC5.31□□□□□ -1.56
SMARCA4P51532 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SMARCA4P51532 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SMARCA4P51532 MIR9-1-201ENST00000385198 89 ntBASIC5.3□□□□□ -1.56
SMARCA4P51532 RNA5SP293-201ENST00000410527 113 ntBASIC5.3□□□□□ -1.56
SMARCA4P51532 GLRXP1-201ENST00000423261 334 ntBASIC5.3□□□□□ -1.56
SMARCA4P51532 RPL21P40-201ENST00000428586 483 ntBASIC5.3□□□□□ -1.56
SMARCA4P51532 AC073508.1-201ENST00000428866 656 ntBASIC5.3□□□□□ -1.56
SMARCA4P51532 ARL2BPP6-201ENST00000512757 439 ntBASIC5.3□□□□□ -1.56
SMARCA4P51532 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.3□□□□□ -1.56
SMARCA4P51532 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC5.3□□□□□ -1.56
SMARCA4P51532 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.3□□□□□ -1.56
SMARCA4P51532 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC5.3□□□□□ -1.56
SMARCA4P51532 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC5.3□□□□□ -1.56
SMARCA4P51532 KPNA2P2-201ENST00000419546 1489 ntBASIC5.3□□□□□ -1.56
SMARCA4P51532 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
SMARCA4P51532 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SMARCA4P51532 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SMARCA4P51532 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SMARCA4P51532 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SMARCA4P51532 RNU6-55P-201ENST00000411092 107 ntBASIC5.3□□□□□ -1.56
SMARCA4P51532 RNU6-954P-201ENST00000411355 107 ntBASIC5.3□□□□□ -1.56
SMARCA4P51532 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.3□□□□□ -1.56
SMARCA4P51532 ISCA1P2-201ENST00000438679 421 ntBASIC5.3□□□□□ -1.56
SMARCA4P51532 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.3□□□□□ -1.56
SMARCA4P51532 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.3□□□□□ -1.56
SMARCA4P51532 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.3□□□□□ -1.56
SMARCA4P51532 AC009097.3-201ENST00000563557 1018 ntBASIC5.3□□□□□ -1.56
SMARCA4P51532 AC106734.1-201ENST00000568646 663 ntBASIC5.3□□□□□ -1.56
SMARCA4P51532 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms