Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 CLIC4P1-201ENST00000453177 535 ntBASIC3.39□□□□□ -1.87
CXCL12P48061 AL354710.1-201ENST00000453641 246 ntBASIC3.39□□□□□ -1.87
CXCL12P48061 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.39□□□□□ -1.87
CXCL12P48061 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.39□□□□□ -1.87
CXCL12P48061 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.39□□□□□ -1.87
CXCL12P48061 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.39□□□□□ -1.87
CXCL12P48061 VN1R79P-201ENST00000593540 513 ntBASIC3.39□□□□□ -1.87
CXCL12P48061 KLKP1-201ENST00000595979 403 ntBASIC3.39□□□□□ -1.87
CXCL12P48061 AC008638.3-201ENST00000603341 463 ntBASIC3.39□□□□□ -1.87
CXCL12P48061 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.39□□□□□ -1.87
CXCL12P48061 AC073657.2-201ENST00000605661 303 ntBASIC3.39□□□□□ -1.87
CXCL12P48061 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.39□□□□□ -1.87
CXCL12P48061 OR6C71P-202ENST00000641886 1107 ntBASIC3.39□□□□□ -1.87
CXCL12P48061 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CXCL12P48061 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
CXCL12P48061 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CXCL12P48061 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.39□□□□□ -1.87
CXCL12P48061 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CXCL12P48061 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
CXCL12P48061 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CXCL12P48061 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.38□□□□□ -1.87
CXCL12P48061 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CXCL12P48061 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CXCL12P48061 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CXCL12P48061 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CXCL12P48061 SNORA5B-201ENST00000363786 132 ntBASIC3.38□□□□□ -1.87
CXCL12P48061 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.38□□□□□ -1.87
CXCL12P48061 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CXCL12P48061 MIR1183-201ENST00000408856 89 ntBASIC3.38□□□□□ -1.87
CXCL12P48061 AC063979.1-201ENST00000415539 377 ntBASIC3.38□□□□□ -1.87
CXCL12P48061 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.38□□□□□ -1.87
CXCL12P48061 BTF3P9-201ENST00000418784 283 ntBASIC3.38□□□□□ -1.87
CXCL12P48061 AC093698.1-201ENST00000423843 571 ntBASIC3.38□□□□□ -1.87
CXCL12P48061 AL445528.1-201ENST00000426330 420 ntBASIC3.38□□□□□ -1.87
CXCL12P48061 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.38□□□□□ -1.87
CXCL12P48061 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.38□□□□□ -1.87
CXCL12P48061 AC114878.1-201ENST00000441166 358 ntBASIC3.38□□□□□ -1.87
CXCL12P48061 CASP3P1-201ENST00000446037 609 ntBASIC3.38□□□□□ -1.87
CXCL12P48061 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.38□□□□□ -1.87
CXCL12P48061 AC025445.1-201ENST00000502728 300 ntBASIC3.38□□□□□ -1.87
CXCL12P48061 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.38□□□□□ -1.87
CXCL12P48061 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CXCL12P48061 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.38□□□□□ -1.87
CXCL12P48061 HMGB1P47-201ENST00000511281 589 ntBASIC3.38□□□□□ -1.87
CXCL12P48061 RNA5SP154-201ENST00000516193 111 ntBASIC3.38□□□□□ -1.87
CXCL12P48061 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.38□□□□□ -1.87
CXCL12P48061 AC027309.2-201ENST00000520566 192 ntBASIC3.38□□□□□ -1.87
CXCL12P48061 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.38□□□□□ -1.87
CXCL12P48061 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.38□□□□□ -1.87
CXCL12P48061 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.38□□□□□ -1.87
CXCL12P48061 AP002404.1-201ENST00000532005 451 ntBASIC3.38□□□□□ -1.87
CXCL12P48061 AC012414.2-201ENST00000559474 187 ntBASIC3.38□□□□□ -1.87
CXCL12P48061 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.38□□□□□ -1.87
CXCL12P48061 OR1AB1P-201ENST00000585564 761 ntBASIC3.38□□□□□ -1.87
CXCL12P48061 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.38□□□□□ -1.87
CXCL12P48061 AC093732.2-201ENST00000607950 274 ntBASIC3.38□□□□□ -1.87
CXCL12P48061 AC009464.1-201ENST00000615731 469 ntBASIC3.38□□□□□ -1.87
CXCL12P48061 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CXCL12P48061 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.38□□□□□ -1.87
CXCL12P48061 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.37□□□□□ -1.87
CXCL12P48061 AC118273.1-201ENST00000525324 3006 ntBASIC3.37□□□□□ -1.87
CXCL12P48061 RNA5SP52-201ENST00000362448 134 ntBASIC3.37□□□□□ -1.87
CXCL12P48061 HSPE1P8-201ENST00000406997 288 ntBASIC3.37□□□□□ -1.87
CXCL12P48061 RNA5SP306-201ENST00000411087 107 ntBASIC3.37□□□□□ -1.87
CXCL12P48061 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.37□□□□□ -1.87
CXCL12P48061 NDUFA5P10-201ENST00000432147 357 ntBASIC3.37□□□□□ -1.87
CXCL12P48061 TRIM60P13-201ENST00000432350 1283 ntBASIC3.37□□□□□ -1.87
CXCL12P48061 AL606490.7-201ENST00000433136 191 ntBASIC3.37□□□□□ -1.87
CXCL12P48061 HMGB1P5-202ENST00000451497 985 ntBASIC3.37□□□□□ -1.87
CXCL12P48061 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.37□□□□□ -1.87
CXCL12P48061 RPS27AP1-201ENST00000475545 471 ntBASIC3.37□□□□□ -1.87
CXCL12P48061 RN7SL429P-201ENST00000479090 223 ntBASIC3.37□□□□□ -1.87
CXCL12P48061 RN7SL489P-201ENST00000486185 223 ntBASIC3.37□□□□□ -1.87
CXCL12P48061 RN7SL327P-201ENST00000488659 223 ntBASIC3.37□□□□□ -1.87
CXCL12P48061 RPL5P23-201ENST00000496040 868 ntBASIC3.37□□□□□ -1.87
CXCL12P48061 HMGB1P21-201ENST00000502313 581 ntBASIC3.37□□□□□ -1.87
CXCL12P48061 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
CXCL12P48061 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.37□□□□□ -1.87
CXCL12P48061 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.37□□□□□ -1.87
CXCL12P48061 PTGES3P3-201ENST00000511479 482 ntBASIC3.37□□□□□ -1.87
CXCL12P48061 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.37□□□□□ -1.87
CXCL12P48061 RNU6-760P-201ENST00000516078 97 ntBASIC3.37□□□□□ -1.87
CXCL12P48061 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.37□□□□□ -1.87
CXCL12P48061 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.37□□□□□ -1.87
CXCL12P48061 AC092747.2-201ENST00000545069 983 ntBASIC3.37□□□□□ -1.87
CXCL12P48061 HIGD1AP1-201ENST00000550979 275 ntBASIC3.37□□□□□ -1.87
CXCL12P48061 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.37□□□□□ -1.87
CXCL12P48061 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.37□□□□□ -1.87
CXCL12P48061 AC010680.3-201ENST00000604215 520 ntBASIC3.37□□□□□ -1.87
CXCL12P48061 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.37□□□□□ -1.87
CXCL12P48061 RN7SL853P-201ENST00000617250 223 ntBASIC3.37□□□□□ -1.87
CXCL12P48061 AL137790.1-201ENST00000634283 177 ntBASIC3.37□□□□□ -1.87
CXCL12P48061 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.37□□□□□ -1.87
CXCL12P48061 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CXCL12P48061 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CXCL12P48061 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
CXCL12P48061 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
CXCL12P48061 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CXCL12P48061 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CXCL12P48061 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 200 ms