Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC092647.3-201ENST00000443044 633 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.67□□□□□ -1.82
NKX2-1P43699 EEF1B2P5-201ENST00000444820 548 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 AC073850.1-201ENST00000449243 255 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 OR52J1P-201ENST00000450596 932 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.67□□□□□ -1.82
NKX2-1P43699 AL122001.1-201ENST00000457027 370 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 SNORD108-201ENST00000459332 71 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 AC005532.2-201ENST00000467154 373 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 RN7SL629P-201ENST00000489622 285 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 PTGES3P3-201ENST00000511479 482 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 AC010587.2-201ENST00000511727 448 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 OR6C73P-201ENST00000546432 358 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.67□□□□□ -1.82
NKX2-1P43699 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.67□□□□□ -1.82
NKX2-1P43699 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC3.67□□□□□ -1.82
NKX2-1P43699 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.67□□□□□ -1.82
NKX2-1P43699 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.67□□□□□ -1.82
NKX2-1P43699 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.67□□□□□ -1.82
NKX2-1P43699 ELOCP28-201ENST00000590044 317 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
NKX2-1P43699 AL353778.1-201ENST00000603149 408 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 AC112220.3-201ENST00000605502 502 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 AL512624.1-201ENST00000613638 469 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NKX2-1P43699 AP002799.1-201ENST00000623552 423 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 AC026422.1-201ENST00000623961 452 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 AC067931.1-201ENST00000624190 671 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.67□□□□□ -1.82
NKX2-1P43699 MIR3974-201ENST00000637126 96 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.67□□□□□ -1.82
NKX2-1P43699 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NKX2-1P43699 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.67□□□□□ -1.82
NKX2-1P43699 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NKX2-1P43699 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
NKX2-1P43699 GDI2P1-201ENST00000429312 1336 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 ZNF542P-204ENST00000482727 1305 ntBASIC3.67□□□□□ -1.82
NKX2-1P43699 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NKX2-1P43699 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
NKX2-1P43699 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.66□□□□□ -1.82
NKX2-1P43699 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NKX2-1P43699 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NKX2-1P43699 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.66□□□□□ -1.82
NKX2-1P43699 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NKX2-1P43699 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.66□□□□□ -1.82
NKX2-1P43699 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
NKX2-1P43699 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
NKX2-1P43699 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NKX2-1P43699 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
NKX2-1P43699 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NKX2-1P43699 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
NKX2-1P43699 RNA5SP507-201ENST00000363603 121 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 SNORD116-2-201ENST00000384274 95 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 SNORD116-6-201ENST00000384711 96 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 ATP5F1P3-201ENST00000397213 657 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 RNU6-757P-201ENST00000410334 100 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 AC068533.2-201ENST00000411872 306 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.66□□□□□ -1.82
NKX2-1P43699 AL139128.1-201ENST00000413921 941 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.66□□□□□ -1.82
NKX2-1P43699 MTCYBP24-201ENST00000420387 1106 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 AC090960.1-201ENST00000421072 306 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NKX2-1P43699 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NKX2-1P43699 CEACAMP7-201ENST00000444105 496 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC3.66□□□□□ -1.82
NKX2-1P43699 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.66□□□□□ -1.82
NKX2-1P43699 MTND2P19-201ENST00000449129 1012 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.66□□□□□ -1.82
NKX2-1P43699 AC010733.1-201ENST00000451515 401 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 AURKAPS2-201ENST00000454983 333 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 MTCO3P11-201ENST00000455103 774 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 AC133473.1-201ENST00000455173 299 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.66□□□□□ -1.82
NKX2-1P43699 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.66□□□□□ -1.82
NKX2-1P43699 AC079804.1-201ENST00000461922 436 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 AC008953.1-201ENST00000497334 318 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.66□□□□□ -1.82
NKX2-1P43699 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC3.66□□□□□ -1.82
NKX2-1P43699 HMGB1P28-201ENST00000507778 552 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.66□□□□□ -1.82
NKX2-1P43699 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.66□□□□□ -1.82
NKX2-1P43699 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.66□□□□□ -1.82
NKX2-1P43699 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.66□□□□□ -1.82
NKX2-1P43699 PHBP17-201ENST00000528576 541 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.66□□□□□ -1.82
NKX2-1P43699 UBE2NP1-201ENST00000545592 458 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 AC008127.2-201ENST00000549925 1075 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 HMGN2P6-201ENST00000551091 273 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 AC008015.1-201ENST00000555505 465 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.66□□□□□ -1.82
NKX2-1P43699 MIR3691-201ENST00000578066 90 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 AC090181.2-201ENST00000602975 672 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 BPIFA4P-203ENST00000603168 689 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 AC073091.2-201ENST00000603205 907 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 RPL23AP92-201ENST00000603609 255 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 AC093783.1-201ENST00000612976 329 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 AC069209.1-201ENST00000619282 651 ntBASIC3.66□□□□□ -1.82
NKX2-1P43699 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
NKX2-1P43699 AC092184.1-201ENST00000625042 715 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms