Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.65□□□□□ -1.83
TNFSF9P41273 AC073522.1-201ENST00000483312 377 ntBASIC3.65□□□□□ -1.83
TNFSF9P41273 RPL7P38-201ENST00000488396 739 ntBASIC3.65□□□□□ -1.83
TNFSF9P41273 AC112198.1-201ENST00000505369 1220 ntBASIC3.65□□□□□ -1.83
TNFSF9P41273 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.65□□□□□ -1.83
TNFSF9P41273 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.65□□□□□ -1.83
TNFSF9P41273 IGKV2-36-201ENST00000519999 223 ntBASIC3.65□□□□□ -1.83
TNFSF9P41273 AC135001.1-201ENST00000544546 283 ntBASIC3.65□□□□□ -1.83
TNFSF9P41273 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.65□□□□□ -1.83
TNFSF9P41273 AC141257.3-201ENST00000572906 215 ntBASIC3.65□□□□□ -1.83
TNFSF9P41273 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.65□□□□□ -1.83
TNFSF9P41273 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.65□□□□□ -1.83
TNFSF9P41273 AC006557.5-201ENST00000603126 811 ntBASIC3.65□□□□□ -1.83
TNFSF9P41273 AC083899.3-201ENST00000603413 594 ntBASIC3.65□□□□□ -1.83
TNFSF9P41273 AL162713.1-201ENST00000604480 262 ntBASIC3.65□□□□□ -1.83
TNFSF9P41273 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.65□□□□□ -1.83
TNFSF9P41273 MTCO1P8-201ENST00000416914 1523 ntBASIC3.65□□□□□ -1.83
TNFSF9P41273 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.64□□□□□ -1.83
TNFSF9P41273 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TNFSF9P41273 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TNFSF9P41273 AL139811.1-201ENST00000424779 2299 ntBASIC3.64□□□□□ -1.83
TNFSF9P41273 AL136964.1-201ENST00000622038 2990 ntBASIC3.64□□□□□ -1.83
TNFSF9P41273 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.64□□□□□ -1.83
TNFSF9P41273 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
TNFSF9P41273 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
TNFSF9P41273 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.64□□□□□ -1.83
TNFSF9P41273 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.64□□□□□ -1.83
TNFSF9P41273 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.64□□□□□ -1.83
TNFSF9P41273 AL590290.1-201ENST00000405336 380 ntBASIC3.64□□□□□ -1.83
TNFSF9P41273 RPL23AP48-201ENST00000406913 488 ntBASIC3.64□□□□□ -1.83
TNFSF9P41273 AC004987.3-201ENST00000413879 771 ntBASIC3.64□□□□□ -1.83
TNFSF9P41273 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.64□□□□□ -1.83
TNFSF9P41273 AC063979.1-201ENST00000415539 377 ntBASIC3.64□□□□□ -1.83
TNFSF9P41273 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.64□□□□□ -1.83
TNFSF9P41273 RPF2P1-201ENST00000424137 906 ntBASIC3.64□□□□□ -1.83
TNFSF9P41273 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.64□□□□□ -1.83
TNFSF9P41273 AL445528.1-201ENST00000426330 420 ntBASIC3.64□□□□□ -1.83
TNFSF9P41273 MTND2P21-201ENST00000436242 1042 ntBASIC3.64□□□□□ -1.83
TNFSF9P41273 AC105402.2-201ENST00000438503 358 ntBASIC3.64□□□□□ -1.83
TNFSF9P41273 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.64□□□□□ -1.83
TNFSF9P41273 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.64□□□□□ -1.83
TNFSF9P41273 AL121877.1-201ENST00000453704 622 ntBASIC3.64□□□□□ -1.83
TNFSF9P41273 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.64□□□□□ -1.83
TNFSF9P41273 RPL32P34-201ENST00000486380 400 ntBASIC3.64□□□□□ -1.83
TNFSF9P41273 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.64□□□□□ -1.83
TNFSF9P41273 MIR2276-201ENST00000516886 89 ntBASIC3.64□□□□□ -1.83
TNFSF9P41273 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.64□□□□□ -1.83
TNFSF9P41273 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.64□□□□□ -1.83
TNFSF9P41273 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.64□□□□□ -1.83
TNFSF9P41273 AP002812.4-201ENST00000532139 286 ntBASIC3.64□□□□□ -1.83
TNFSF9P41273 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.64□□□□□ -1.83
TNFSF9P41273 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.64□□□□□ -1.83
TNFSF9P41273 AC010680.4-201ENST00000605334 543 ntBASIC3.64□□□□□ -1.83
TNFSF9P41273 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.64□□□□□ -1.83
TNFSF9P41273 U6.48-201ENST00000618523 106 ntBASIC3.64□□□□□ -1.83
TNFSF9P41273 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.64□□□□□ -1.83
TNFSF9P41273 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.64□□□□□ -1.83
TNFSF9P41273 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.64□□□□□ -1.83
TNFSF9P41273 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
TNFSF9P41273 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.64□□□□□ -1.83
TNFSF9P41273 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.64□□□□□ -1.83
TNFSF9P41273 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TNFSF9P41273 AL356489.2-201ENST00000566968 3528 ntBASIC3.64□□□□□ -1.83
TNFSF9P41273 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
TNFSF9P41273 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
TNFSF9P41273 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
TNFSF9P41273 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.63□□□□□ -1.83
TNFSF9P41273 GTF2H2B-203ENST00000508065 1432 ntBASIC3.63□□□□□ -1.83
TNFSF9P41273 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.63□□□□□ -1.83
TNFSF9P41273 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.63□□□□□ -1.83
TNFSF9P41273 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.63□□□□□ -1.83
TNFSF9P41273 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.63□□□□□ -1.83
TNFSF9P41273 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TNFSF9P41273 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
TNFSF9P41273 RNU1-70P-201ENST00000362618 164 ntBASIC3.63□□□□□ -1.83
TNFSF9P41273 RNU1-87P-201ENST00000363727 170 ntBASIC3.63□□□□□ -1.83
TNFSF9P41273 SNORA27.3-201ENST00000364937 134 ntBASIC3.63□□□□□ -1.83
TNFSF9P41273 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TNFSF9P41273 RNA5SP239-201ENST00000410218 129 ntBASIC3.63□□□□□ -1.83
TNFSF9P41273 RANP4-201ENST00000413361 655 ntBASIC3.63□□□□□ -1.83
TNFSF9P41273 AC126124.2-201ENST00000413542 321 ntBASIC3.63□□□□□ -1.83
TNFSF9P41273 AC004022.2-201ENST00000413824 193 ntBASIC3.63□□□□□ -1.83
TNFSF9P41273 AC234782.4-201ENST00000417646 1048 ntBASIC3.63□□□□□ -1.83
TNFSF9P41273 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.63□□□□□ -1.83
TNFSF9P41273 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.63□□□□□ -1.83
TNFSF9P41273 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.63□□□□□ -1.83
TNFSF9P41273 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.63□□□□□ -1.83
TNFSF9P41273 AC008264.1-201ENST00000447612 367 ntBASIC3.63□□□□□ -1.83
TNFSF9P41273 RN7SL601P-201ENST00000471221 293 ntBASIC3.63□□□□□ -1.83
TNFSF9P41273 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.63□□□□□ -1.83
TNFSF9P41273 MTCO1P31-201ENST00000506355 492 ntBASIC3.63□□□□□ -1.83
TNFSF9P41273 PCBP2P3-201ENST00000509726 843 ntBASIC3.63□□□□□ -1.83
TNFSF9P41273 VWA8P1-201ENST00000510889 176 ntBASIC3.63□□□□□ -1.83
TNFSF9P41273 RNU6-760P-201ENST00000516078 97 ntBASIC3.63□□□□□ -1.83
TNFSF9P41273 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TNFSF9P41273 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.63□□□□□ -1.83
TNFSF9P41273 UBE2NP1-201ENST00000545592 458 ntBASIC3.63□□□□□ -1.83
TNFSF9P41273 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.63□□□□□ -1.83
TNFSF9P41273 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.63□□□□□ -1.83
TNFSF9P41273 AL121594.4-201ENST00000556211 1196 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms