Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RNU2-6P-201ENST00000411404 190 ntBASIC3.74□□□□□ -1.81
HMGCLP35914 MTND2P15-201ENST00000418575 892 ntBASIC3.74□□□□□ -1.81
HMGCLP35914 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.74□□□□□ -1.81
HMGCLP35914 DEFB130D-201ENST00000426866 237 ntBASIC3.74□□□□□ -1.81
HMGCLP35914 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HMGCLP35914 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.74□□□□□ -1.81
HMGCLP35914 RPL21P133-201ENST00000443666 476 ntBASIC3.74□□□□□ -1.81
HMGCLP35914 NANOGP10-201ENST00000453325 895 ntBASIC3.74□□□□□ -1.81
HMGCLP35914 TVP23BP2-201ENST00000455082 615 ntBASIC3.74□□□□□ -1.81
HMGCLP35914 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.74□□□□□ -1.81
HMGCLP35914 SNORD108-201ENST00000459332 71 ntBASIC3.74□□□□□ -1.81
HMGCLP35914 RPL23AP12-201ENST00000467573 473 ntBASIC3.74□□□□□ -1.81
HMGCLP35914 AC022034.3-201ENST00000471393 478 ntBASIC3.74□□□□□ -1.81
HMGCLP35914 AC091959.2-201ENST00000477363 321 ntBASIC3.74□□□□□ -1.81
HMGCLP35914 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.74□□□□□ -1.81
HMGCLP35914 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.74□□□□□ -1.81
HMGCLP35914 Vault.1-201ENST00000516474 102 ntBASIC3.74□□□□□ -1.81
HMGCLP35914 RNA5SP143-201ENST00000516936 115 ntBASIC3.74□□□□□ -1.81
HMGCLP35914 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HMGCLP35914 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.74□□□□□ -1.81
HMGCLP35914 AC025260.1-201ENST00000548858 430 ntBASIC3.74□□□□□ -1.81
HMGCLP35914 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HMGCLP35914 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.74□□□□□ -1.81
HMGCLP35914 AC106785.1-201ENST00000565935 262 ntBASIC3.74□□□□□ -1.81
HMGCLP35914 AC023825.1-201ENST00000566704 1030 ntBASIC3.74□□□□□ -1.81
HMGCLP35914 AC011492.1-201ENST00000600023 315 ntBASIC3.74□□□□□ -1.81
HMGCLP35914 AP002906.1-201ENST00000603405 233 ntBASIC3.74□□□□□ -1.81
HMGCLP35914 Z82195.1-201ENST00000604558 398 ntBASIC3.74□□□□□ -1.81
HMGCLP35914 AL163642.2-201ENST00000604722 1019 ntBASIC3.74□□□□□ -1.81
HMGCLP35914 BRDTP1-201ENST00000605735 677 ntBASIC3.74□□□□□ -1.81
HMGCLP35914 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.74□□□□□ -1.81
HMGCLP35914 AC018754.1-201ENST00000607486 925 ntBASIC3.74□□□□□ -1.81
HMGCLP35914 AC097504.2-201ENST00000608088 454 ntBASIC3.74□□□□□ -1.81
HMGCLP35914 AC124016.2-201ENST00000610058 665 ntBASIC3.74□□□□□ -1.81
HMGCLP35914 AC096586.1-201ENST00000610267 561 ntBASIC3.74□□□□□ -1.81
HMGCLP35914 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.74□□□□□ -1.81
HMGCLP35914 AC139769.3-201ENST00000618383 175 ntBASIC3.74□□□□□ -1.81
HMGCLP35914 AC073569.3-201ENST00000619055 682 ntBASIC3.74□□□□□ -1.81
HMGCLP35914 AC132825.7-201ENST00000638744 335 ntBASIC3.74□□□□□ -1.81
HMGCLP35914 AC006927.2-201ENST00000639256 389 ntBASIC3.74□□□□□ -1.81
HMGCLP35914 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
HMGCLP35914 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
HMGCLP35914 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.74□□□□□ -1.81
HMGCLP35914 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HMGCLP35914 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HMGCLP35914 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HMGCLP35914 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
HMGCLP35914 NCAPGP1-201ENST00000505112 1814 ntBASIC3.73□□□□□ -1.81
HMGCLP35914 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HMGCLP35914 RNU5B-4P-201ENST00000363508 111 ntBASIC3.73□□□□□ -1.81
HMGCLP35914 RNU1-64P-201ENST00000365443 163 ntBASIC3.73□□□□□ -1.81
HMGCLP35914 RNA5SP167-201ENST00000365461 116 ntBASIC3.73□□□□□ -1.81
HMGCLP35914 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.73□□□□□ -1.81
HMGCLP35914 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.73□□□□□ -1.81
HMGCLP35914 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.73□□□□□ -1.81
HMGCLP35914 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.73□□□□□ -1.81
HMGCLP35914 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
HMGCLP35914 AL139247.1-201ENST00000422768 325 ntBASIC3.73□□□□□ -1.81
HMGCLP35914 OR4F13P-201ENST00000428478 931 ntBASIC3.73□□□□□ -1.81
HMGCLP35914 IFNNP1-201ENST00000429219 553 ntBASIC3.73□□□□□ -1.81
HMGCLP35914 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.73□□□□□ -1.81
HMGCLP35914 RNF2P1-201ENST00000442955 1010 ntBASIC3.73□□□□□ -1.81
HMGCLP35914 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.73□□□□□ -1.81
HMGCLP35914 AC068135.1-201ENST00000446164 246 ntBASIC3.73□□□□□ -1.81
HMGCLP35914 AL096803.2-201ENST00000450032 677 ntBASIC3.73□□□□□ -1.81
HMGCLP35914 AP000873.1-201ENST00000463987 400 ntBASIC3.73□□□□□ -1.81
HMGCLP35914 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HMGCLP35914 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.73□□□□□ -1.81
HMGCLP35914 AC026402.1-201ENST00000513642 170 ntBASIC3.73□□□□□ -1.81
HMGCLP35914 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.73□□□□□ -1.81
HMGCLP35914 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.73□□□□□ -1.81
HMGCLP35914 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.73□□□□□ -1.81
HMGCLP35914 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.73□□□□□ -1.81
HMGCLP35914 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.73□□□□□ -1.81
HMGCLP35914 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
HMGCLP35914 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.73□□□□□ -1.81
HMGCLP35914 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.73□□□□□ -1.81
HMGCLP35914 AC125494.3-201ENST00000602759 455 ntBASIC3.73□□□□□ -1.81
HMGCLP35914 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.73□□□□□ -1.81
HMGCLP35914 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.73□□□□□ -1.81
HMGCLP35914 AC126544.2-201ENST00000625174 749 ntBASIC3.73□□□□□ -1.81
HMGCLP35914 AC004808.1-201ENST00000627671 721 ntBASIC3.73□□□□□ -1.81
HMGCLP35914 SEC63P2-201ENST00000503863 1939 ntBASIC3.73□□□□□ -1.81
HMGCLP35914 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HMGCLP35914 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
HMGCLP35914 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.73□□□□□ -1.81
HMGCLP35914 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.73□□□□□ -1.81
HMGCLP35914 SAGE2P-201ENST00000420011 2126 ntBASIC3.73□□□□□ -1.81
HMGCLP35914 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HMGCLP35914 LINC00561-201ENST00000565815 2738 ntBASIC3.72□□□□□ -1.81
HMGCLP35914 USP8P1-201ENST00000494673 3183 ntBASIC3.72□□□□□ -1.81
HMGCLP35914 RNF6P1-201ENST00000444889 1784 ntBASIC3.72□□□□□ -1.81
HMGCLP35914 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HMGCLP35914 MIR122-201ENST00000385044 85 ntBASIC3.72□□□□□ -1.81
HMGCLP35914 SNORD65C-201ENST00000390962 71 ntBASIC3.72□□□□□ -1.81
HMGCLP35914 SOD2P1-201ENST00000396543 562 ntBASIC3.72□□□□□ -1.81
HMGCLP35914 ATP5F1P4-201ENST00000397288 746 ntBASIC3.72□□□□□ -1.81
HMGCLP35914 HMGB3P18-201ENST00000406327 590 ntBASIC3.72□□□□□ -1.81
HMGCLP35914 AC009237.5-201ENST00000414271 501 ntBASIC3.72□□□□□ -1.81
HMGCLP35914 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms