Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SNORA35B-201ENST00000607417 129 ntBASIC2.35□□□□□ -2.03
CKS2P33552 AC015802.5-201ENST00000607478 399 ntBASIC2.35□□□□□ -2.03
CKS2P33552 RPL23AP61-201ENST00000623642 466 ntBASIC2.35□□□□□ -2.03
CKS2P33552 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC2.35□□□□□ -2.03
CKS2P33552 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.35□□□□□ -2.03
CKS2P33552 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.35□□□□□ -2.03
CKS2P33552 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
CKS2P33552 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CKS2P33552 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC2.34□□□□□ -2.03
CKS2P33552 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CKS2P33552 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CKS2P33552 Y_RNA.62-201ENST00000362840 99 ntBASIC2.34□□□□□ -2.03
CKS2P33552 RNA5SP274-201ENST00000410484 108 ntBASIC2.34□□□□□ -2.03
CKS2P33552 ATP5A1P2-201ENST00000412323 255 ntBASIC2.34□□□□□ -2.03
CKS2P33552 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC2.34□□□□□ -2.03
CKS2P33552 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC2.34□□□□□ -2.03
CKS2P33552 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC2.34□□□□□ -2.03
CKS2P33552 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC2.34□□□□□ -2.03
CKS2P33552 AC245028.1-201ENST00000423259 256 ntBASIC2.34□□□□□ -2.03
CKS2P33552 AC093151.1-201ENST00000427711 313 ntBASIC2.34□□□□□ -2.03
CKS2P33552 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC2.34□□□□□ -2.03
CKS2P33552 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.34□□□□□ -2.03
CKS2P33552 HSPE1P28-201ENST00000443139 211 ntBASIC2.34□□□□□ -2.03
CKS2P33552 RPL21P89-201ENST00000444021 467 ntBASIC2.34□□□□□ -2.03
CKS2P33552 GAPDHP27-201ENST00000447427 1020 ntBASIC2.34□□□□□ -2.03
CKS2P33552 AC114755.5-201ENST00000447760 831 ntBASIC2.34□□□□□ -2.03
CKS2P33552 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC2.34□□□□□ -2.03
CKS2P33552 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CKS2P33552 RN7SL132P-201ENST00000478131 296 ntBASIC2.34□□□□□ -2.03
CKS2P33552 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.34□□□□□ -2.03
CKS2P33552 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
CKS2P33552 AC118282.1-201ENST00000506408 765 ntBASIC2.34□□□□□ -2.03
CKS2P33552 AP001960.1-201ENST00000506494 658 ntBASIC2.34□□□□□ -2.03
CKS2P33552 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.34□□□□□ -2.03
CKS2P33552 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.34□□□□□ -2.03
CKS2P33552 TMEM248P1-201ENST00000510579 951 ntBASIC2.34□□□□□ -2.03
CKS2P33552 AC119751.1-201ENST00000513357 765 ntBASIC2.34□□□□□ -2.03
CKS2P33552 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.34□□□□□ -2.03
CKS2P33552 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.34□□□□□ -2.03
CKS2P33552 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.34□□□□□ -2.03
CKS2P33552 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC2.34□□□□□ -2.03
CKS2P33552 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC2.34□□□□□ -2.03
CKS2P33552 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC2.34□□□□□ -2.03
CKS2P33552 MIR4284-201ENST00000578924 81 ntBASIC2.34□□□□□ -2.03
CKS2P33552 SS18L2P2-201ENST00000583960 235 ntBASIC2.34□□□□□ -2.03
CKS2P33552 AC024940.4-201ENST00000605507 246 ntBASIC2.34□□□□□ -2.03
CKS2P33552 HMGN2P28-201ENST00000606102 262 ntBASIC2.34□□□□□ -2.03
CKS2P33552 AC055764.2-201ENST00000610089 670 ntBASIC2.34□□□□□ -2.03
CKS2P33552 AP000894.4-201ENST00000610185 483 ntBASIC2.34□□□□□ -2.03
CKS2P33552 AL157817.1-201ENST00000614264 790 ntBASIC2.34□□□□□ -2.03
CKS2P33552 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.34□□□□□ -2.03
CKS2P33552 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.34□□□□□ -2.03
CKS2P33552 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.34□□□□□ -2.03
CKS2P33552 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.34□□□□□ -2.03
CKS2P33552 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.34□□□□□ -2.04
CKS2P33552 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.33□□□□□ -2.04
CKS2P33552 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.33□□□□□ -2.04
CKS2P33552 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CKS2P33552 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CKS2P33552 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.33□□□□□ -2.04
CKS2P33552 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CKS2P33552 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.33□□□□□ -2.04
CKS2P33552 RPL23AP57-201ENST00000332361 466 ntBASIC2.33□□□□□ -2.04
CKS2P33552 RNU1-70P-201ENST00000362618 164 ntBASIC2.33□□□□□ -2.04
CKS2P33552 RNA5SP119-201ENST00000362715 117 ntBASIC2.33□□□□□ -2.04
CKS2P33552 SNORA7.2-201ENST00000364446 145 ntBASIC2.33□□□□□ -2.04
CKS2P33552 RNA5SP51-201ENST00000364750 119 ntBASIC2.33□□□□□ -2.04
CKS2P33552 RNA5SP317-201ENST00000410176 116 ntBASIC2.33□□□□□ -2.04
CKS2P33552 RN7SKP111-201ENST00000410349 271 ntBASIC2.33□□□□□ -2.04
CKS2P33552 RNA5SP311-201ENST00000411290 116 ntBASIC2.33□□□□□ -2.04
CKS2P33552 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.33□□□□□ -2.04
CKS2P33552 AC241520.1-201ENST00000422654 1099 ntBASIC2.33□□□□□ -2.04
CKS2P33552 YY1P1-201ENST00000427625 668 ntBASIC2.33□□□□□ -2.04
CKS2P33552 AC007563.3-201ENST00000433233 371 ntBASIC2.33□□□□□ -2.04
CKS2P33552 RPL29P29-201ENST00000448725 423 ntBASIC2.33□□□□□ -2.04
CKS2P33552 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.33□□□□□ -2.04
CKS2P33552 OR2AF1P-201ENST00000454899 889 ntBASIC2.33□□□□□ -2.04
CKS2P33552 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC2.33□□□□□ -2.04
CKS2P33552 RPS29P22-201ENST00000472363 168 ntBASIC2.33□□□□□ -2.04
CKS2P33552 GAPDHP36-201ENST00000480688 918 ntBASIC2.33□□□□□ -2.04
CKS2P33552 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC2.33□□□□□ -2.04
CKS2P33552 AC108860.1-201ENST00000484521 383 ntBASIC2.33□□□□□ -2.04
CKS2P33552 AC108064.1-201ENST00000513791 460 ntBASIC2.33□□□□□ -2.04
CKS2P33552 RNA5SP315-201ENST00000516340 116 ntBASIC2.33□□□□□ -2.04
CKS2P33552 RNA5SP312-201ENST00000517068 116 ntBASIC2.33□□□□□ -2.04
CKS2P33552 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.33□□□□□ -2.04
CKS2P33552 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.33□□□□□ -2.04
CKS2P33552 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.33□□□□□ -2.04
CKS2P33552 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.33□□□□□ -2.04
CKS2P33552 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC2.33□□□□□ -2.04
CKS2P33552 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC2.33□□□□□ -2.04
CKS2P33552 AC053481.4-201ENST00000583164 216 ntBASIC2.33□□□□□ -2.04
CKS2P33552 AC068790.4-201ENST00000602474 263 ntBASIC2.33□□□□□ -2.04
CKS2P33552 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.33□□□□□ -2.04
CKS2P33552 AC090912.3-201ENST00000609775 533 ntBASIC2.33□□□□□ -2.04
CKS2P33552 PACRG-211ENST00000621363 360 ntTSL 5 BASIC2.33□□□□□ -2.04
CKS2P33552 AC073348.1-201ENST00000623002 331 ntBASIC2.33□□□□□ -2.04
CKS2P33552 AC084035.1-201ENST00000634543 607 ntBASIC2.33□□□□□ -2.04
CKS2P33552 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.33□□□□□ -2.04
CKS2P33552 AL136164.4-201ENST00000625013 2135 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms