Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
CD40P25942 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.78□□□□□ -1.64
CD40P25942 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.78□□□□□ -1.64
CD40P25942 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD40P25942 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.78□□□□□ -1.64
CD40P25942 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.78□□□□□ -1.64
CD40P25942 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CD40P25942 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CD40P25942 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CD40P25942 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CD40P25942 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CD40P25942 AC138915.3-201ENST00000562908 1389 ntBASIC4.78□□□□□ -1.64
CD40P25942 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CD40P25942 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
CD40P25942 OR4F13P-202ENST00000560066 2054 ntBASIC4.77□□□□□ -1.65
CD40P25942 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CD40P25942 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD40P25942 AL359955.1-201ENST00000455242 3275 ntBASIC4.77□□□□□ -1.65
CD40P25942 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.77□□□□□ -1.65
CD40P25942 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CD40P25942 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD40P25942 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD40P25942 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CD40P25942 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC4.77□□□□□ -1.65
CD40P25942 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CD40P25942 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD40P25942 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD40P25942 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CD40P25942 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.77□□□□□ -1.65
CD40P25942 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD40P25942 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CD40P25942 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CD40P25942 RNA5SP514-201ENST00000363717 111 ntBASIC4.77□□□□□ -1.65
CD40P25942 RNU1-77P-201ENST00000390868 162 ntBASIC4.77□□□□□ -1.65
CD40P25942 RNU6-876P-201ENST00000391295 104 ntBASIC4.77□□□□□ -1.65
CD40P25942 FGF7P8-201ENST00000402994 292 ntBASIC4.77□□□□□ -1.65
CD40P25942 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.77□□□□□ -1.65
CD40P25942 AMD1P2-201ENST00000412936 992 ntBASIC4.77□□□□□ -1.65
CD40P25942 JKAMPP1-201ENST00000413804 919 ntBASIC4.77□□□□□ -1.65
CD40P25942 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.77□□□□□ -1.65
CD40P25942 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CD40P25942 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.77□□□□□ -1.65
CD40P25942 RPL7L1P9-201ENST00000431298 745 ntBASIC4.77□□□□□ -1.65
CD40P25942 CYCSP6-201ENST00000434498 302 ntBASIC4.77□□□□□ -1.65
CD40P25942 AC105399.1-202ENST00000447303 205 ntBASIC4.77□□□□□ -1.65
CD40P25942 AC053481.1-201ENST00000467217 306 ntBASIC4.77□□□□□ -1.65
CD40P25942 RN7SL447P-201ENST00000494711 245 ntBASIC4.77□□□□□ -1.65
CD40P25942 AC098799.2-201ENST00000509466 868 ntBASIC4.77□□□□□ -1.65
CD40P25942 RNU6-528P-201ENST00000516926 100 ntBASIC4.77□□□□□ -1.65
CD40P25942 RNA5SP337-201ENST00000517007 109 ntBASIC4.77□□□□□ -1.65
CD40P25942 AC022616.3-201ENST00000523940 148 ntBASIC4.77□□□□□ -1.65
CD40P25942 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC4.77□□□□□ -1.65
CD40P25942 OR4P1P-201ENST00000530808 1136 ntBASIC4.77□□□□□ -1.65
CD40P25942 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.77□□□□□ -1.65
CD40P25942 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.77□□□□□ -1.65
CD40P25942 AL049779.2-201ENST00000553847 315 ntBASIC4.77□□□□□ -1.65
CD40P25942 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.77□□□□□ -1.65
CD40P25942 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.77□□□□□ -1.65
CD40P25942 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.77□□□□□ -1.65
CD40P25942 AL136363.1-201ENST00000605349 337 ntBASIC4.77□□□□□ -1.65
CD40P25942 SDR42E1P1-201ENST00000611327 477 ntBASIC4.77□□□□□ -1.65
CD40P25942 AC012409.3-201ENST00000611343 981 ntBASIC4.77□□□□□ -1.65
CD40P25942 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
CD40P25942 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CD40P25942 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CD40P25942 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD40P25942 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.77□□□□□ -1.65
CD40P25942 LINC00622-201ENST00000562811 1570 ntBASIC4.77□□□□□ -1.65
CD40P25942 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.77□□□□□ -1.65
CD40P25942 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC4.77□□□□□ -1.65
CD40P25942 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD40P25942 TTC41P-205ENST00000551270 3963 ntBASIC4.77□□□□□ -1.65
CD40P25942 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.77□□□□□ -1.65
CD40P25942 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC4.77□□□□□ -1.65
CD40P25942 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CD40P25942 STK3-216ENST00000523601 3107 ntTSL 2 BASIC4.77□□□□□ -1.65
CD40P25942 AC068870.1-201ENST00000563737 2455 ntBASIC4.77□□□□□ -1.65
CD40P25942 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CD40P25942 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CD40P25942 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CD40P25942 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CD40P25942 AC125336.1-201ENST00000508893 2827 ntBASIC4.76□□□□□ -1.65
CD40P25942 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.76□□□□□ -1.65
CD40P25942 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CD40P25942 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CD40P25942 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CD40P25942 SNORA72.1-201ENST00000363485 129 ntBASIC4.76□□□□□ -1.65
CD40P25942 RNA5SP335-201ENST00000363817 110 ntBASIC4.76□□□□□ -1.65
CD40P25942 RNY1P12-201ENST00000364251 105 ntBASIC4.76□□□□□ -1.65
CD40P25942 Y_RNA.493-201ENST00000384422 102 ntBASIC4.76□□□□□ -1.65
CD40P25942 GLULP6-201ENST00000399502 913 ntBASIC4.76□□□□□ -1.65
CD40P25942 AL603766.1-201ENST00000407763 664 ntBASIC4.76□□□□□ -1.65
CD40P25942 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.76□□□□□ -1.65
CD40P25942 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CD40P25942 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CD40P25942 FTH1P1-201ENST00000437933 532 ntBASIC4.76□□□□□ -1.65
CD40P25942 RN7SL30P-201ENST00000488416 306 ntBASIC4.76□□□□□ -1.65
CD40P25942 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.76□□□□□ -1.65
CD40P25942 AL139099.1-201ENST00000497398 403 ntBASIC4.76□□□□□ -1.65
CD40P25942 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms