Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 RN7SKP260-201ENST00000516907 149 ntBASIC5.64□□□□□ -1.51
ITGA4P13612 AC104383.1-201ENST00000530297 370 ntBASIC5.64□□□□□ -1.51
ITGA4P13612 AP003122.4-201ENST00000530980 758 ntBASIC5.64□□□□□ -1.51
ITGA4P13612 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.64□□□□□ -1.51
ITGA4P13612 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ITGA4P13612 MIR3682-201ENST00000581338 84 ntBASIC5.64□□□□□ -1.51
ITGA4P13612 AC011840.5-201ENST00000582125 771 ntBASIC5.64□□□□□ -1.51
ITGA4P13612 MAGOH2P-202ENST00000584384 429 ntBASIC5.64□□□□□ -1.51
ITGA4P13612 HMGN1P30-201ENST00000589286 268 ntBASIC5.64□□□□□ -1.51
ITGA4P13612 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ITGA4P13612 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.64□□□□□ -1.51
ITGA4P13612 AC008814.1-201ENST00000603797 406 ntBASIC5.64□□□□□ -1.51
ITGA4P13612 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ITGA4P13612 MTND4P12-201ENST00000498999 1377 ntBASIC5.64□□□□□ -1.51
ITGA4P13612 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ITGA4P13612 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ITGA4P13612 AL022311.1-201ENST00000623726 19416 ntBASIC5.63□□□□□ -1.51
ITGA4P13612 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ITGA4P13612 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
ITGA4P13612 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ITGA4P13612 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ITGA4P13612 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.63□□□□□ -1.51
ITGA4P13612 RNA5SP123-201ENST00000363244 119 ntBASIC5.63□□□□□ -1.51
ITGA4P13612 RN7SKP103-201ENST00000363848 320 ntBASIC5.63□□□□□ -1.51
ITGA4P13612 Y_RNA.295-201ENST00000364918 102 ntBASIC5.63□□□□□ -1.51
ITGA4P13612 GJA6P-201ENST00000415117 1042 ntBASIC5.63□□□□□ -1.51
ITGA4P13612 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ITGA4P13612 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.63□□□□□ -1.51
ITGA4P13612 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ITGA4P13612 RAD23BP1-201ENST00000421404 1227 ntBASIC5.63□□□□□ -1.51
ITGA4P13612 DDX39BP1-205ENST00000422507 192 ntBASIC5.63□□□□□ -1.51
ITGA4P13612 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.63□□□□□ -1.51
ITGA4P13612 ARPC3P1-201ENST00000437218 533 ntBASIC5.63□□□□□ -1.51
ITGA4P13612 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.63□□□□□ -1.51
ITGA4P13612 RSU1P2-202ENST00000437884 485 ntBASIC5.63□□□□□ -1.51
ITGA4P13612 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ITGA4P13612 USP9YP8-201ENST00000441913 500 ntBASIC5.63□□□□□ -1.51
ITGA4P13612 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC5.63□□□□□ -1.51
ITGA4P13612 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.63□□□□□ -1.51
ITGA4P13612 HIGD1AP8-201ENST00000453927 274 ntBASIC5.63□□□□□ -1.51
ITGA4P13612 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.63□□□□□ -1.51
ITGA4P13612 AMD1P1-201ENST00000457220 922 ntBASIC5.63□□□□□ -1.51
ITGA4P13612 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.63□□□□□ -1.51
ITGA4P13612 RN7SL189P-201ENST00000468631 289 ntBASIC5.63□□□□□ -1.51
ITGA4P13612 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.63□□□□□ -1.51
ITGA4P13612 MTND1P3-201ENST00000484956 952 ntBASIC5.63□□□□□ -1.51
ITGA4P13612 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC5.63□□□□□ -1.51
ITGA4P13612 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.63□□□□□ -1.51
ITGA4P13612 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.63□□□□□ -1.51
ITGA4P13612 STMN1P2-201ENST00000508435 439 ntBASIC5.63□□□□□ -1.51
ITGA4P13612 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.63□□□□□ -1.51
ITGA4P13612 Y_RNA.704-201ENST00000516851 102 ntBASIC5.63□□□□□ -1.51
ITGA4P13612 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.63□□□□□ -1.51
ITGA4P13612 OR5M2P-201ENST00000529003 936 ntBASIC5.63□□□□□ -1.51
ITGA4P13612 AC109635.3-201ENST00000529536 185 ntBASIC5.63□□□□□ -1.51
ITGA4P13612 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.63□□□□□ -1.51
ITGA4P13612 AC068714.1-201ENST00000559623 800 ntBASIC5.63□□□□□ -1.51
ITGA4P13612 AL157394.1-201ENST00000562983 1224 ntBASIC5.63□□□□□ -1.51
ITGA4P13612 AL133457.1-201ENST00000564251 987 ntBASIC5.63□□□□□ -1.51
ITGA4P13612 BNIP3P9-201ENST00000603714 553 ntBASIC5.63□□□□□ -1.51
ITGA4P13612 AC112230.1-201ENST00000604342 547 ntBASIC5.63□□□□□ -1.51
ITGA4P13612 AL049634.3-201ENST00000604968 457 ntBASIC5.63□□□□□ -1.51
ITGA4P13612 AL365503.1-201ENST00000605247 905 ntBASIC5.63□□□□□ -1.51
ITGA4P13612 AC016727.1-205ENST00000605437 569 ntBASIC5.63□□□□□ -1.51
ITGA4P13612 AL390208.1-201ENST00000605885 644 ntBASIC5.63□□□□□ -1.51
ITGA4P13612 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.63□□□□□ -1.51
ITGA4P13612 AP003117.2-201ENST00000606010 545 ntBASIC5.63□□□□□ -1.51
ITGA4P13612 AC078899.5-201ENST00000612475 178 ntBASIC5.63□□□□□ -1.51
ITGA4P13612 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.63□□□□□ -1.51
ITGA4P13612 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
ITGA4P13612 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
ITGA4P13612 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.63□□□□□ -1.51
ITGA4P13612 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
ITGA4P13612 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ITGA4P13612 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.63□□□□□ -1.51
ITGA4P13612 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.63□□□□□ -1.51
ITGA4P13612 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
ITGA4P13612 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ITGA4P13612 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ITGA4P13612 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
ITGA4P13612 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
ITGA4P13612 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ITGA4P13612 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
ITGA4P13612 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
ITGA4P13612 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ITGA4P13612 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
ITGA4P13612 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
ITGA4P13612 AC083843.2-201ENST00000568248 6253 ntBASIC5.62□□□□□ -1.51
ITGA4P13612 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
ITGA4P13612 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
ITGA4P13612 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.62□□□□□ -1.51
ITGA4P13612 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.62□□□□□ -1.51
ITGA4P13612 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ITGA4P13612 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ITGA4P13612 Y_RNA.61-201ENST00000362835 102 ntBASIC5.62□□□□□ -1.51
ITGA4P13612 Y_RNA.89-201ENST00000363031 102 ntBASIC5.62□□□□□ -1.51
ITGA4P13612 RNU6-534P-201ENST00000364877 106 ntBASIC5.62□□□□□ -1.51
ITGA4P13612 Y_RNA.409-201ENST00000383990 98 ntBASIC5.62□□□□□ -1.51
ITGA4P13612 RNU6-921P-201ENST00000384361 107 ntBASIC5.62□□□□□ -1.51
ITGA4P13612 Y_RNA.573-201ENST00000384763 105 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms