Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC244100.1-202ENST00000621554 382 ntBASIC3.58□□□□□ -1.84
APOEP02649 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.58□□□□□ -1.84
APOEP02649 AC009950.2-201ENST00000636548 183 ntBASIC3.58□□□□□ -1.84
APOEP02649 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
APOEP02649 SRP72P2-201ENST00000344851 1979 ntBASIC3.58□□□□□ -1.84
APOEP02649 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
APOEP02649 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
APOEP02649 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.57□□□□□ -1.84
APOEP02649 AL079305.1-201ENST00000623159 3008 ntBASIC3.57□□□□□ -1.84
APOEP02649 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
APOEP02649 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.57□□□□□ -1.84
APOEP02649 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.57□□□□□ -1.84
APOEP02649 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
APOEP02649 RNU6-1251P-201ENST00000364502 107 ntBASIC3.57□□□□□ -1.84
APOEP02649 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
APOEP02649 MIR183-201ENST00000384958 110 ntBASIC3.57□□□□□ -1.84
APOEP02649 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
APOEP02649 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
APOEP02649 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
APOEP02649 RN7SKP111-201ENST00000410349 271 ntBASIC3.57□□□□□ -1.84
APOEP02649 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
APOEP02649 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.57□□□□□ -1.84
APOEP02649 AL159987.2-201ENST00000432754 307 ntBASIC3.57□□□□□ -1.84
APOEP02649 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.57□□□□□ -1.84
APOEP02649 UBE2V2P1-201ENST00000434717 398 ntBASIC3.57□□□□□ -1.84
APOEP02649 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.57□□□□□ -1.84
APOEP02649 MTCYBP29-201ENST00000436327 1006 ntBASIC3.57□□□□□ -1.84
APOEP02649 CYCSP43-201ENST00000438233 310 ntBASIC3.57□□□□□ -1.84
APOEP02649 RPL26P28-201ENST00000451325 435 ntBASIC3.57□□□□□ -1.84
APOEP02649 SNORD108-201ENST00000459332 71 ntBASIC3.57□□□□□ -1.84
APOEP02649 RPL23AP67-201ENST00000465341 474 ntBASIC3.57□□□□□ -1.84
APOEP02649 SNORD116-30-201ENST00000516468 85 ntBASIC3.57□□□□□ -1.84
APOEP02649 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.57□□□□□ -1.84
APOEP02649 AC007458.1-201ENST00000542812 373 ntBASIC3.57□□□□□ -1.84
APOEP02649 AC032011.1-201ENST00000611703 1549 ntBASIC3.57□□□□□ -1.84
APOEP02649 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.57□□□□□ -1.84
APOEP02649 AC116563.2-201ENST00000624751 535 ntBASIC3.57□□□□□ -1.84
APOEP02649 U6.105-201ENST00000637379 88 ntBASIC3.57□□□□□ -1.84
APOEP02649 AL049781.1-201ENST00000623195 3585 ntBASIC3.57□□□□□ -1.84
APOEP02649 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
APOEP02649 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
APOEP02649 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
APOEP02649 AC025125.1-201ENST00000624743 1922 ntBASIC3.56□□□□□ -1.84
APOEP02649 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
APOEP02649 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
APOEP02649 AP002088.1-201ENST00000382740 395 ntBASIC3.56□□□□□ -1.84
APOEP02649 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
APOEP02649 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
APOEP02649 AC093578.1-201ENST00000415219 368 ntBASIC3.56□□□□□ -1.84
APOEP02649 LIPT1P1-201ENST00000415870 1186 ntBASIC3.56□□□□□ -1.84
APOEP02649 TRGV6-201ENST00000417928 299 ntBASIC3.56□□□□□ -1.84
APOEP02649 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.56□□□□□ -1.84
APOEP02649 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.56□□□□□ -1.84
APOEP02649 AL451062.2-201ENST00000427515 271 ntBASIC3.56□□□□□ -1.84
APOEP02649 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.56□□□□□ -1.84
APOEP02649 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.56□□□□□ -1.84
APOEP02649 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.56□□□□□ -1.84
APOEP02649 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
APOEP02649 PRDX3P3-201ENST00000447765 522 ntBASIC3.56□□□□□ -1.84
APOEP02649 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.56□□□□□ -1.84
APOEP02649 AC007967.1-201ENST00000455422 1159 ntBASIC3.56□□□□□ -1.84
APOEP02649 RPL21P10-201ENST00000463521 490 ntBASIC3.56□□□□□ -1.84
APOEP02649 AC010401.1-201ENST00000463867 348 ntBASIC3.56□□□□□ -1.84
APOEP02649 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.56□□□□□ -1.84
APOEP02649 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.56□□□□□ -1.84
APOEP02649 AP001636.2-201ENST00000525517 696 ntBASIC3.56□□□□□ -1.84
APOEP02649 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
APOEP02649 AC011611.1-201ENST00000552179 197 ntBASIC3.56□□□□□ -1.84
APOEP02649 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.56□□□□□ -1.84
APOEP02649 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.56□□□□□ -1.84
APOEP02649 MIR3944-201ENST00000581277 108 ntBASIC3.56□□□□□ -1.84
APOEP02649 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.56□□□□□ -1.84
APOEP02649 AC243654.2-201ENST00000612843 443 ntBASIC3.56□□□□□ -1.84
APOEP02649 AL589935.2-201ENST00000616471 1231 ntBASIC3.56□□□□□ -1.84
APOEP02649 AC139769.3-201ENST00000618383 175 ntBASIC3.56□□□□□ -1.84
APOEP02649 MIR4278-201ENST00000636094 69 ntBASIC3.56□□□□□ -1.84
APOEP02649 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.56□□□□□ -1.84
APOEP02649 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
APOEP02649 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
APOEP02649 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
APOEP02649 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
APOEP02649 RNA5SP72-201ENST00000364442 117 ntBASIC3.55□□□□□ -1.84
APOEP02649 MIR490-201ENST00000384865 128 ntBASIC3.55□□□□□ -1.84
APOEP02649 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
APOEP02649 RPS3AP25-201ENST00000411660 793 ntBASIC3.55□□□□□ -1.84
APOEP02649 AC013404.1-201ENST00000413068 249 ntBASIC3.55□□□□□ -1.84
APOEP02649 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
APOEP02649 AP000907.1-201ENST00000428428 510 ntBASIC3.55□□□□□ -1.84
APOEP02649 AC005019.1-201ENST00000436455 431 ntBASIC3.55□□□□□ -1.84
APOEP02649 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.55□□□□□ -1.84
APOEP02649 CYCSP20-201ENST00000473154 315 ntBASIC3.55□□□□□ -1.84
APOEP02649 AC092185.1-201ENST00000491371 97 ntBASIC3.55□□□□□ -1.84
APOEP02649 WBP1LP4-201ENST00000505043 344 ntBASIC3.55□□□□□ -1.84
APOEP02649 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.55□□□□□ -1.84
APOEP02649 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.55□□□□□ -1.84
APOEP02649 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.55□□□□□ -1.84
APOEP02649 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.55□□□□□ -1.84
APOEP02649 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.55□□□□□ -1.84
APOEP02649 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.55□□□□□ -1.84
APOEP02649 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms