Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.07□□□□□ -1.6
COL3A1P02461 MIR5187-201ENST00000583479 76 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.07□□□□□ -1.6
COL3A1P02461 AC025588.4-201ENST00000615802 908 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 AC067852.7-201ENST00000623270 535 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 AC091931.1-201ENST00000623488 728 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.07□□□□□ -1.6
COL3A1P02461 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL3A1P02461 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
COL3A1P02461 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL3A1P02461 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL3A1P02461 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL3A1P02461 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL3A1P02461 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL3A1P02461 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL3A1P02461 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL3A1P02461 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.07□□□□□ -1.6
COL3A1P02461 IPO8P1-201ENST00000455509 3109 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL3A1P02461 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL3A1P02461 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
COL3A1P02461 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
COL3A1P02461 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.07□□□□□ -1.6
COL3A1P02461 RNU6ATAC25P-201ENST00000408798 117 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 RN7SKP202-201ENST00000410439 330 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 RPS3AP37-201ENST00000419176 745 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.07□□□□□ -1.6
COL3A1P02461 ELOCP18-201ENST00000434209 337 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC5.07□□□□□ -1.6
COL3A1P02461 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.07□□□□□ -1.6
COL3A1P02461 AC069285.2-201ENST00000440210 275 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 MTCYBP3-201ENST00000445588 1137 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 AL133477.1-201ENST00000457472 514 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 RPL6P9-201ENST00000466502 859 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.07□□□□□ -1.6
COL3A1P02461 AC119751.1-201ENST00000513357 765 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC5.07□□□□□ -1.6
COL3A1P02461 AC006518.2-201ENST00000542513 940 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 AC135628.1-201ENST00000568867 534 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 AL354943.1-201ENST00000572103 781 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.07□□□□□ -1.6
COL3A1P02461 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.07□□□□□ -1.6
COL3A1P02461 AC078795.2-201ENST00000602835 1252 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 RN7SKP299-201ENST00000606679 301 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.07□□□□□ -1.6
COL3A1P02461 VN1R74P-201ENST00000613259 503 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 U6atac.1-201ENST00000616025 117 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 AL591424.2-201ENST00000617023 128 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 AL158062.1-201ENST00000619632 745 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 ATE1-AS1-202ENST00000636460 506 ntBASIC5.07□□□□□ -1.6
COL3A1P02461 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.06□□□□□ -1.6
COL3A1P02461 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC5.06□□□□□ -1.6
COL3A1P02461 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
COL3A1P02461 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL3A1P02461 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL3A1P02461 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL3A1P02461 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL3A1P02461 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
COL3A1P02461 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.06□□□□□ -1.6
COL3A1P02461 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL3A1P02461 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.06□□□□□ -1.6
COL3A1P02461 AC087565.3-202ENST00000642085 1603 ntBASIC5.06□□□□□ -1.6
COL3A1P02461 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.06□□□□□ -1.6
COL3A1P02461 AC010300.1-201ENST00000600671 5134 ntBASIC5.06□□□□□ -1.6
COL3A1P02461 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.06□□□□□ -1.6
COL3A1P02461 BTBD10P1-201ENST00000549824 1352 ntBASIC5.06□□□□□ -1.6
COL3A1P02461 AC083843.3-201ENST00000623679 2186 ntBASIC5.06□□□□□ -1.6
COL3A1P02461 SNORD46.1-201ENST00000364139 104 ntBASIC5.06□□□□□ -1.6
COL3A1P02461 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.06□□□□□ -1.6
COL3A1P02461 AL136310.1-201ENST00000404926 654 ntBASIC5.06□□□□□ -1.6
COL3A1P02461 RAB9AP3-201ENST00000412737 573 ntBASIC5.06□□□□□ -1.6
COL3A1P02461 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.06□□□□□ -1.6
COL3A1P02461 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.06□□□□□ -1.6
COL3A1P02461 AC087650.1-201ENST00000431445 468 ntBASIC5.06□□□□□ -1.6
COL3A1P02461 AL353748.1-201ENST00000440753 474 ntBASIC5.06□□□□□ -1.6
COL3A1P02461 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC5.06□□□□□ -1.6
COL3A1P02461 RAB9AP1-201ENST00000449393 573 ntBASIC5.06□□□□□ -1.6
COL3A1P02461 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC5.06□□□□□ -1.6
COL3A1P02461 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC5.06□□□□□ -1.6
COL3A1P02461 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.06□□□□□ -1.6
COL3A1P02461 RPS26P15-201ENST00000488067 348 ntBASIC5.06□□□□□ -1.6
COL3A1P02461 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.06□□□□□ -1.6
COL3A1P02461 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.06□□□□□ -1.6
COL3A1P02461 MTCO1P31-201ENST00000506355 492 ntBASIC5.06□□□□□ -1.6
COL3A1P02461 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL3A1P02461 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.06□□□□□ -1.6
COL3A1P02461 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
COL3A1P02461 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC5.06□□□□□ -1.6
COL3A1P02461 IGHV3-63-201ENST00000518422 341 ntBASIC5.06□□□□□ -1.6
COL3A1P02461 AC234778.2-201ENST00000566241 354 ntBASIC5.06□□□□□ -1.6
COL3A1P02461 MTCO3P24-201ENST00000572729 782 ntBASIC5.06□□□□□ -1.6
COL3A1P02461 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC5.06□□□□□ -1.6
COL3A1P02461 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.06□□□□□ -1.6
COL3A1P02461 AL139395.1-201ENST00000603662 160 ntBASIC5.06□□□□□ -1.6
COL3A1P02461 AC079880.2-201ENST00000603790 1213 ntBASIC5.06□□□□□ -1.6
COL3A1P02461 AL035411.2-201ENST00000604022 421 ntBASIC5.06□□□□□ -1.6
COL3A1P02461 AC112230.1-201ENST00000604342 547 ntBASIC5.06□□□□□ -1.6
COL3A1P02461 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.06□□□□□ -1.6
COL3A1P02461 AL356121.2-201ENST00000624715 780 ntBASIC5.06□□□□□ -1.6
COL3A1P02461 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms