Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DQA1P01909 AP005229.2-201ENST00000609980 697 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 AC105429.2-201ENST00000610567 517 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 AC084824.5-201ENST00000612009 413 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 AC011944.2-201ENST00000624440 683 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DQA1P01909 AC005261.4-201ENST00000600047 1385 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 NMD3P1-201ENST00000439704 1488 ntBASIC2.81□□□□□ -1.96
HLA-DQA1P01909 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DQA1P01909 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DQA1P01909 OTUD4P1-201ENST00000237841 3067 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC2.8□□□□□ -1.96
HLA-DQA1P01909 AC073073.2-201ENST00000609827 2578 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
HLA-DQA1P01909 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DQA1P01909 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DQA1P01909 AC025263.3-201ENST00000622965 1396 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DQA1P01909 RNA5SP383-201ENST00000362934 120 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DQA1P01909 RNU6-354P-201ENST00000383862 107 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 RNU6-610P-201ENST00000384264 107 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 SNORA51.12-201ENST00000384448 134 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 SNORA70E-201ENST00000384492 135 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 AP002784.2-201ENST00000397300 549 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 BTBD10P2-201ENST00000404779 676 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DQA1P01909 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DQA1P01909 RPS27AP7-201ENST00000422792 455 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 GLRXP1-201ENST00000423261 334 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 RPL18P10-201ENST00000425606 538 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 UBE2V1P6-201ENST00000430840 422 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 AL513175.1-201ENST00000431492 780 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DQA1P01909 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.8□□□□□ -1.96
HLA-DQA1P01909 RPL23AP22-201ENST00000437556 453 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.8□□□□□ -1.96
HLA-DQA1P01909 AC006480.1-201ENST00000449887 378 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 BX276092.4-201ENST00000452056 248 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 AC009963.2-201ENST00000453431 138 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.8□□□□□ -1.96
HLA-DQA1P01909 RPL21P11-201ENST00000461458 483 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 PRDX3P4-201ENST00000470828 747 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 RN7SL860P-201ENST00000473738 223 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 RPL21P103-201ENST00000479921 488 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC2.8□□□□□ -1.96
HLA-DQA1P01909 RN7SL691P-201ENST00000494487 301 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DQA1P01909 AC008958.1-201ENST00000511047 682 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DQA1P01909 RNU6-202P-201ENST00000515998 96 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DQA1P01909 OR8G5-201ENST00000524943 1041 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DQA1P01909 AP000926.4-201ENST00000527351 454 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 CYCSP29-201ENST00000533731 318 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC2.8□□□□□ -1.96
HLA-DQA1P01909 AC093510.2-201ENST00000562820 896 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC2.8□□□□□ -1.96
HLA-DQA1P01909 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC2.8□□□□□ -1.96
HLA-DQA1P01909 MIR4789-201ENST00000577469 82 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DQA1P01909 AC124283.4-201ENST00000581815 456 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC2.8□□□□□ -1.96
HLA-DQA1P01909 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC2.8□□□□□ -1.96
HLA-DQA1P01909 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC2.8□□□□□ -1.96
HLA-DQA1P01909 VN1R88P-201ENST00000596787 292 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 AL020997.3-201ENST00000602843 359 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 AC006254.3-201ENST00000603353 884 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 YWHAQP7-201ENST00000603536 658 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 AC114781.5-201ENST00000615297 108 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC2.8□□□□□ -1.96
HLA-DQA1P01909 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.8□□□□□ -1.96
HLA-DQA1P01909 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DQA1P01909 MIR7641-1-201ENST00000627518 61 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 FAM157B-203ENST00000639350 358 ntBASIC2.8□□□□□ -1.96
HLA-DQA1P01909 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DQA1P01909 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC2.79□□□□□ -1.96
HLA-DQA1P01909 AP002001.2-201ENST00000529025 1469 ntBASIC2.79□□□□□ -1.96
HLA-DQA1P01909 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC2.79□□□□□ -1.96
HLA-DQA1P01909 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DQA1P01909 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DQA1P01909 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DQA1P01909 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DQA1P01909 MIR30E-201ENST00000362104 92 ntBASIC2.79□□□□□ -1.96
HLA-DQA1P01909 RNU1-32P-201ENST00000363937 159 ntBASIC2.79□□□□□ -1.96
HLA-DQA1P01909 MIR199A2-201ENST00000385289 110 ntBASIC2.79□□□□□ -1.96
HLA-DQA1P01909 DSTNP4-201ENST00000399472 474 ntBASIC2.79□□□□□ -1.96
HLA-DQA1P01909 AC136624.1-201ENST00000400791 413 ntBASIC2.79□□□□□ -1.96
HLA-DQA1P01909 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DQA1P01909 AC069218.2-201ENST00000411665 344 ntBASIC2.79□□□□□ -1.96
HLA-DQA1P01909 AC108032.1-201ENST00000416706 207 ntBASIC2.79□□□□□ -1.96
HLA-DQA1P01909 AL807761.1-201ENST00000417622 171 ntBASIC2.79□□□□□ -1.96
HLA-DQA1P01909 HMGB3P20-201ENST00000417997 600 ntBASIC2.79□□□□□ -1.96
HLA-DQA1P01909 RPL31P45-201ENST00000419532 356 ntBASIC2.79□□□□□ -1.96
HLA-DQA1P01909 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.79□□□□□ -1.96
HLA-DQA1P01909 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC2.79□□□□□ -1.96
HLA-DQA1P01909 OR5BE1P-201ENST00000425977 939 ntBASIC2.79□□□□□ -1.96
HLA-DQA1P01909 AL009174.1-201ENST00000426577 416 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms