Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AL133338.2-201ENST00000604292 736 ntBASIC4.19□□□□□ -1.74
LDLRP01130 AL160290.3-201ENST00000604869 165 ntBASIC4.19□□□□□ -1.74
LDLRP01130 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.19□□□□□ -1.74
LDLRP01130 Z98200.1-201ENST00000607298 470 ntBASIC4.19□□□□□ -1.74
LDLRP01130 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
LDLRP01130 AL133243.1-201ENST00000614487 366 ntBASIC4.19□□□□□ -1.74
LDLRP01130 AC098679.4-201ENST00000624241 654 ntBASIC4.19□□□□□ -1.74
LDLRP01130 AP000843.1-201ENST00000624880 701 ntBASIC4.19□□□□□ -1.74
LDLRP01130 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.19□□□□□ -1.74
LDLRP01130 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.19□□□□□ -1.74
LDLRP01130 MFSD8-245ENST00000641743 948 ntBASIC4.19□□□□□ -1.74
LDLRP01130 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
LDLRP01130 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.19□□□□□ -1.74
LDLRP01130 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.19□□□□□ -1.74
LDLRP01130 DCAF13P3-201ENST00000561147 1334 ntBASIC4.19□□□□□ -1.74
LDLRP01130 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
LDLRP01130 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
LDLRP01130 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.18□□□□□ -1.74
LDLRP01130 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.18□□□□□ -1.74
LDLRP01130 PNPT1P2-201ENST00000456768 2050 ntBASIC4.18□□□□□ -1.74
LDLRP01130 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
LDLRP01130 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.18□□□□□ -1.74
LDLRP01130 DDX43P2-201ENST00000604753 1354 ntBASIC4.18□□□□□ -1.74
LDLRP01130 AL512646.1-201ENST00000269395 1077 ntBASIC4.18□□□□□ -1.74
LDLRP01130 RNU4-28P-201ENST00000364739 141 ntBASIC4.18□□□□□ -1.74
LDLRP01130 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.18□□□□□ -1.74
LDLRP01130 SKINT1L-201ENST00000401057 817 ntBASIC4.18□□□□□ -1.74
LDLRP01130 SNORA11F-201ENST00000408237 128 ntBASIC4.18□□□□□ -1.74
LDLRP01130 RNA5SP44-201ENST00000410446 133 ntBASIC4.18□□□□□ -1.74
LDLRP01130 RNA5SP39-201ENST00000411245 120 ntBASIC4.18□□□□□ -1.74
LDLRP01130 PRELID3BP11-201ENST00000414230 479 ntBASIC4.18□□□□□ -1.74
LDLRP01130 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.18□□□□□ -1.74
LDLRP01130 AL356320.2-201ENST00000417263 507 ntBASIC4.18□□□□□ -1.74
LDLRP01130 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.18□□□□□ -1.74
LDLRP01130 RPF2P1-201ENST00000424137 906 ntBASIC4.18□□□□□ -1.74
LDLRP01130 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.18□□□□□ -1.74
LDLRP01130 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LDLRP01130 RPS6P12-201ENST00000432491 726 ntBASIC4.18□□□□□ -1.74
LDLRP01130 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.18□□□□□ -1.74
LDLRP01130 OR4C10P-201ENST00000434991 931 ntBASIC4.18□□□□□ -1.74
LDLRP01130 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.18□□□□□ -1.74
LDLRP01130 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.18□□□□□ -1.74
LDLRP01130 THAP5P1-201ENST00000439089 262 ntBASIC4.18□□□□□ -1.74
LDLRP01130 ELOCP8-201ENST00000439309 332 ntBASIC4.18□□□□□ -1.74
LDLRP01130 ELOCP15-201ENST00000442090 332 ntBASIC4.18□□□□□ -1.74
LDLRP01130 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.18□□□□□ -1.74
LDLRP01130 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.18□□□□□ -1.74
LDLRP01130 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.18□□□□□ -1.74
LDLRP01130 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.18□□□□□ -1.74
LDLRP01130 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LDLRP01130 AC004263.1-201ENST00000479327 332 ntBASIC4.18□□□□□ -1.74
LDLRP01130 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.18□□□□□ -1.74
LDLRP01130 DYNLL1P6-201ENST00000503440 264 ntBASIC4.18□□□□□ -1.74
LDLRP01130 AC139783.2-201ENST00000504847 1145 ntBASIC4.18□□□□□ -1.74
LDLRP01130 AC011352.3-201ENST00000505162 593 ntBASIC4.18□□□□□ -1.74
LDLRP01130 AC008885.2-201ENST00000509506 930 ntBASIC4.18□□□□□ -1.74
LDLRP01130 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.18□□□□□ -1.74
LDLRP01130 AC010486.3-201ENST00000511602 785 ntBASIC4.18□□□□□ -1.74
LDLRP01130 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.18□□□□□ -1.74
LDLRP01130 SNORA67.7-201ENST00000516664 135 ntBASIC4.18□□□□□ -1.74
LDLRP01130 IGLVIV-65-201ENST00000517313 360 ntBASIC4.18□□□□□ -1.74
LDLRP01130 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.18□□□□□ -1.74
LDLRP01130 MTCO1P49-201ENST00000523429 802 ntBASIC4.18□□□□□ -1.74
LDLRP01130 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.18□□□□□ -1.74
LDLRP01130 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.18□□□□□ -1.74
LDLRP01130 AC004217.3-201ENST00000551552 878 ntBASIC4.18□□□□□ -1.74
LDLRP01130 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.18□□□□□ -1.74
LDLRP01130 AC053481.3-201ENST00000577881 843 ntBASIC4.18□□□□□ -1.74
LDLRP01130 MIR4458-201ENST00000578872 75 ntBASIC4.18□□□□□ -1.74
LDLRP01130 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.18□□□□□ -1.74
LDLRP01130 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.18□□□□□ -1.74
LDLRP01130 IPO5P1-202ENST00000600039 287 ntBASIC4.18□□□□□ -1.74
LDLRP01130 AC010620.1-201ENST00000601088 1102 ntBASIC4.18□□□□□ -1.74
LDLRP01130 AL390816.3-201ENST00000604527 1066 ntBASIC4.18□□□□□ -1.74
LDLRP01130 AL139344.1-201ENST00000605228 195 ntBASIC4.18□□□□□ -1.74
LDLRP01130 MIR432-201ENST00000606207 94 ntBASIC4.18□□□□□ -1.74
LDLRP01130 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.18□□□□□ -1.74
LDLRP01130 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.18□□□□□ -1.74
LDLRP01130 AC024257.5-201ENST00000612739 531 ntBASIC4.18□□□□□ -1.74
LDLRP01130 AC006133.1-201ENST00000617106 264 ntBASIC4.18□□□□□ -1.74
LDLRP01130 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
LDLRP01130 AC090897.3-201ENST00000636973 1157 ntBASIC4.18□□□□□ -1.74
LDLRP01130 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LDLRP01130 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
LDLRP01130 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
LDLRP01130 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
LDLRP01130 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
LDLRP01130 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
LDLRP01130 AC018529.3-201ENST00000624212 2254 ntBASIC4.18□□□□□ -1.74
LDLRP01130 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
LDLRP01130 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.17□□□□□ -1.74
LDLRP01130 MTND4P5-201ENST00000435821 1374 ntBASIC4.17□□□□□ -1.74
LDLRP01130 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
LDLRP01130 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
LDLRP01130 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
LDLRP01130 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
LDLRP01130 snoZ40.1-201ENST00000364540 72 ntBASIC4.17□□□□□ -1.74
LDLRP01130 RNU6-707P-201ENST00000364647 95 ntBASIC4.17□□□□□ -1.74
LDLRP01130 SNORA71.2-201ENST00000364941 134 ntBASIC4.17□□□□□ -1.74
LDLRP01130 AL133412.1-201ENST00000380194 2992 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms