Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC023050.2-201ENST00000544968 387 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.95□□□□□ -1.78
CLPTM1O96005 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.95□□□□□ -1.78
CLPTM1O96005 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.95□□□□□ -1.78
CLPTM1O96005 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.95□□□□□ -1.78
CLPTM1O96005 AC090695.1-201ENST00000561269 1222 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.95□□□□□ -1.78
CLPTM1O96005 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLPTM1O96005 AC090751.1-201ENST00000566966 267 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 AC005412.1-201ENST00000580812 1049 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.95□□□□□ -1.78
CLPTM1O96005 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.95□□□□□ -1.78
CLPTM1O96005 VN1R88P-201ENST00000596787 292 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 AC234771.5-201ENST00000600161 514 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 MRPS35P3-201ENST00000603189 709 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 AC008745.1-201ENST00000604064 271 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 AP000255.1-201ENST00000610276 676 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 TUSC7.1-201ENST00000610969 165 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 AL592148.2-201ENST00000612210 372 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 U7.8-201ENST00000619968 63 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 AF001550.2-201ENST00000636643 217 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CLPTM1O96005 MFSD8-245ENST00000641743 948 ntBASIC3.95□□□□□ -1.78
CLPTM1O96005 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLPTM1O96005 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.94□□□□□ -1.78
CLPTM1O96005 AC096656.1-201ENST00000623826 1364 ntBASIC3.94□□□□□ -1.78
CLPTM1O96005 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLPTM1O96005 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLPTM1O96005 SNORD6-201ENST00000365444 73 ntBASIC3.94□□□□□ -1.78
CLPTM1O96005 SNORA37-201ENST00000384504 129 ntBASIC3.94□□□□□ -1.78
CLPTM1O96005 RNU6-83P-201ENST00000384568 112 ntBASIC3.94□□□□□ -1.78
CLPTM1O96005 HMGN2P8-201ENST00000391458 268 ntBASIC3.94□□□□□ -1.78
CLPTM1O96005 AL590290.1-201ENST00000405336 380 ntBASIC3.94□□□□□ -1.78
CLPTM1O96005 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.94□□□□□ -1.78
CLPTM1O96005 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.94□□□□□ -1.78
CLPTM1O96005 AL009174.1-201ENST00000426577 416 ntBASIC3.94□□□□□ -1.78
CLPTM1O96005 MTCO1P54-201ENST00000430139 712 ntBASIC3.94□□□□□ -1.78
CLPTM1O96005 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.94□□□□□ -1.78
CLPTM1O96005 SETD6P1-201ENST00000444575 317 ntBASIC3.94□□□□□ -1.78
CLPTM1O96005 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.94□□□□□ -1.78
CLPTM1O96005 BX248409.1-201ENST00000455497 255 ntBASIC3.94□□□□□ -1.78
CLPTM1O96005 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.94□□□□□ -1.78
CLPTM1O96005 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.94□□□□□ -1.78
CLPTM1O96005 AC010307.1-201ENST00000467206 836 ntBASIC3.94□□□□□ -1.78
CLPTM1O96005 AL161747.1-201ENST00000480068 358 ntBASIC3.94□□□□□ -1.78
CLPTM1O96005 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.94□□□□□ -1.78
CLPTM1O96005 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.94□□□□□ -1.78
CLPTM1O96005 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.94□□□□□ -1.78
CLPTM1O96005 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.94□□□□□ -1.78
CLPTM1O96005 IGKV2-36-201ENST00000519999 223 ntBASIC3.94□□□□□ -1.78
CLPTM1O96005 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.94□□□□□ -1.78
CLPTM1O96005 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.94□□□□□ -1.78
CLPTM1O96005 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.94□□□□□ -1.78
CLPTM1O96005 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.94□□□□□ -1.78
CLPTM1O96005 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.94□□□□□ -1.78
CLPTM1O96005 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.94□□□□□ -1.78
CLPTM1O96005 BNIP3P24-201ENST00000593398 557 ntBASIC3.94□□□□□ -1.78
CLPTM1O96005 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.94□□□□□ -1.78
CLPTM1O96005 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.94□□□□□ -1.78
CLPTM1O96005 AC021749.1-201ENST00000604322 607 ntBASIC3.94□□□□□ -1.78
CLPTM1O96005 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLPTM1O96005 AC079416.3-201ENST00000624479 549 ntBASIC3.94□□□□□ -1.78
CLPTM1O96005 AP003072.4-201ENST00000624580 310 ntBASIC3.94□□□□□ -1.78
CLPTM1O96005 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.94□□□□□ -1.78
CLPTM1O96005 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.94□□□□□ -1.78
CLPTM1O96005 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.94□□□□□ -1.78
CLPTM1O96005 AC087821.2-201ENST00000637086 450 ntBASIC3.94□□□□□ -1.78
CLPTM1O96005 OR2L1P-202ENST00000641567 1023 ntBASIC3.94□□□□□ -1.78
CLPTM1O96005 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.94□□□□□ -1.78
CLPTM1O96005 LINC00561-201ENST00000565815 2738 ntBASIC3.94□□□□□ -1.78
CLPTM1O96005 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
CLPTM1O96005 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLPTM1O96005 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.94□□□□□ -1.78
CLPTM1O96005 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.94□□□□□ -1.78
CLPTM1O96005 AP005901.5-201ENST00000545779 1796 ntBASIC3.94□□□□□ -1.78
CLPTM1O96005 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.94□□□□□ -1.78
CLPTM1O96005 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLPTM1O96005 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CLPTM1O96005 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLPTM1O96005 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.93□□□□□ -1.78
CLPTM1O96005 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.93□□□□□ -1.78
CLPTM1O96005 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CLPTM1O96005 AC092162.3-201ENST00000624511 1624 ntBASIC3.93□□□□□ -1.78
CLPTM1O96005 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLPTM1O96005 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLPTM1O96005 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.93□□□□□ -1.78
CLPTM1O96005 MIR659-201ENST00000384963 97 ntBASIC3.93□□□□□ -1.78
CLPTM1O96005 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CLPTM1O96005 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.93□□□□□ -1.78
CLPTM1O96005 UQCRBP1-201ENST00000421129 336 ntBASIC3.93□□□□□ -1.78
CLPTM1O96005 AC245028.1-201ENST00000423259 256 ntBASIC3.93□□□□□ -1.78
CLPTM1O96005 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.93□□□□□ -1.78
CLPTM1O96005 RPEP3-201ENST00000425462 676 ntBASIC3.93□□□□□ -1.78
CLPTM1O96005 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.93□□□□□ -1.78
CLPTM1O96005 RPS6P15-201ENST00000431996 751 ntBASIC3.93□□□□□ -1.78
CLPTM1O96005 AC096638.2-201ENST00000434965 711 ntBASIC3.93□□□□□ -1.78
CLPTM1O96005 RPL23AP93-201ENST00000440847 484 ntBASIC3.93□□□□□ -1.78
CLPTM1O96005 AC092809.1-201ENST00000441469 474 ntBASIC3.93□□□□□ -1.78
CLPTM1O96005 MTND2P22-201ENST00000444325 1033 ntBASIC3.93□□□□□ -1.78
CLPTM1O96005 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms