Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDN9O95484 RPS20P32-201ENST00000456044 356 ntBASIC3.56□□□□□ -1.84
CLDN9O95484 AP000873.1-201ENST00000463987 400 ntBASIC3.56□□□□□ -1.84
CLDN9O95484 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDN9O95484 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.56□□□□□ -1.84
CLDN9O95484 RN7SL132P-201ENST00000478131 296 ntBASIC3.56□□□□□ -1.84
CLDN9O95484 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.56□□□□□ -1.84
CLDN9O95484 AC008885.2-201ENST00000509506 930 ntBASIC3.56□□□□□ -1.84
CLDN9O95484 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.56□□□□□ -1.84
CLDN9O95484 AC104108.1-201ENST00000509930 412 ntBASIC3.56□□□□□ -1.84
CLDN9O95484 MTND4LP31-201ENST00000514859 294 ntBASIC3.56□□□□□ -1.84
CLDN9O95484 RNU6-1102P-201ENST00000516149 96 ntBASIC3.56□□□□□ -1.84
CLDN9O95484 SNORA70.14-201ENST00000516205 110 ntBASIC3.56□□□□□ -1.84
CLDN9O95484 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDN9O95484 AP000889.1-201ENST00000530968 660 ntBASIC3.56□□□□□ -1.84
CLDN9O95484 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.56□□□□□ -1.84
CLDN9O95484 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.56□□□□□ -1.84
CLDN9O95484 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.56□□□□□ -1.84
CLDN9O95484 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.56□□□□□ -1.84
CLDN9O95484 AC244505.7-201ENST00000599675 272 ntBASIC3.56□□□□□ -1.84
CLDN9O95484 RNA5SP108-201ENST00000605921 117 ntBASIC3.56□□□□□ -1.84
CLDN9O95484 AC112503.1-201ENST00000608436 391 ntBASIC3.56□□□□□ -1.84
CLDN9O95484 AC004943.3-201ENST00000624116 600 ntBASIC3.56□□□□□ -1.84
CLDN9O95484 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.56□□□□□ -1.84
CLDN9O95484 AP000553.6-201ENST00000641242 118 ntBASIC3.56□□□□□ -1.84
CLDN9O95484 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.56□□□□□ -1.84
CLDN9O95484 HSPA8P1-201ENST00000425843 1833 ntBASIC3.56□□□□□ -1.84
CLDN9O95484 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN9O95484 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.56□□□□□ -1.84
CLDN9O95484 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLDN9O95484 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLDN9O95484 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
CLDN9O95484 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.55□□□□□ -1.84
CLDN9O95484 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLDN9O95484 MTND4P8-201ENST00000514997 1362 ntBASIC3.55□□□□□ -1.84
CLDN9O95484 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLDN9O95484 RNU6-283P-201ENST00000364788 107 ntBASIC3.55□□□□□ -1.84
CLDN9O95484 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CLDN9O95484 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.55□□□□□ -1.84
CLDN9O95484 MTHFD2P2-201ENST00000407725 247 ntBASIC3.55□□□□□ -1.84
CLDN9O95484 AC241520.1-201ENST00000422654 1099 ntBASIC3.55□□□□□ -1.84
CLDN9O95484 AC073310.1-201ENST00000423226 1033 ntBASIC3.55□□□□□ -1.84
CLDN9O95484 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.55□□□□□ -1.84
CLDN9O95484 AC009263.1-201ENST00000441193 1239 ntBASIC3.55□□□□□ -1.84
CLDN9O95484 RPS26P30-201ENST00000443431 335 ntBASIC3.55□□□□□ -1.84
CLDN9O95484 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.55□□□□□ -1.84
CLDN9O95484 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.55□□□□□ -1.84
CLDN9O95484 AC008280.2-201ENST00000455473 307 ntBASIC3.55□□□□□ -1.84
CLDN9O95484 HMGB3P30-201ENST00000457863 606 ntBASIC3.55□□□□□ -1.84
CLDN9O95484 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.55□□□□□ -1.84
CLDN9O95484 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.55□□□□□ -1.84
CLDN9O95484 AC093755.1-201ENST00000512950 1023 ntBASIC3.55□□□□□ -1.84
CLDN9O95484 AC023632.4-201ENST00000517783 191 ntBASIC3.55□□□□□ -1.84
CLDN9O95484 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.55□□□□□ -1.84
CLDN9O95484 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.55□□□□□ -1.84
CLDN9O95484 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.55□□□□□ -1.84
CLDN9O95484 AC087499.8-201ENST00000578406 226 ntBASIC3.55□□□□□ -1.84
CLDN9O95484 MIR5187-201ENST00000583479 76 ntBASIC3.55□□□□□ -1.84
CLDN9O95484 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.55□□□□□ -1.84
CLDN9O95484 YWHAQP7-201ENST00000603536 658 ntBASIC3.55□□□□□ -1.84
CLDN9O95484 AC091948.2-201ENST00000636510 279 ntBASIC3.55□□□□□ -1.84
CLDN9O95484 AC138649.5-201ENST00000637456 137 ntBASIC3.55□□□□□ -1.84
CLDN9O95484 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
CLDN9O95484 AC066616.2-201ENST00000559334 1481 ntBASIC3.54□□□□□ -1.84
CLDN9O95484 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLDN9O95484 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.54□□□□□ -1.84
CLDN9O95484 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLDN9O95484 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLDN9O95484 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CLDN9O95484 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.54□□□□□ -1.84
CLDN9O95484 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.54□□□□□ -1.84
CLDN9O95484 RPL32P23-201ENST00000397237 405 ntBASIC3.54□□□□□ -1.84
CLDN9O95484 BTBD10P2-201ENST00000404779 676 ntBASIC3.54□□□□□ -1.84
CLDN9O95484 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.54□□□□□ -1.84
CLDN9O95484 AL139247.1-201ENST00000422768 325 ntBASIC3.54□□□□□ -1.84
CLDN9O95484 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.54□□□□□ -1.84
CLDN9O95484 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.54□□□□□ -1.84
CLDN9O95484 AL365396.1-201ENST00000430854 671 ntBASIC3.54□□□□□ -1.84
CLDN9O95484 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.54□□□□□ -1.84
CLDN9O95484 RPL23AP33-201ENST00000442301 452 ntBASIC3.54□□□□□ -1.84
CLDN9O95484 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLDN9O95484 AC010655.1-201ENST00000449336 292 ntBASIC3.54□□□□□ -1.84
CLDN9O95484 AC146507.1-201ENST00000468335 354 ntBASIC3.54□□□□□ -1.84
CLDN9O95484 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLDN9O95484 AC015724.1-201ENST00000478577 156 ntBASIC3.54□□□□□ -1.84
CLDN9O95484 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.54□□□□□ -1.84
CLDN9O95484 NIPA2P2-201ENST00000496376 1083 ntBASIC3.54□□□□□ -1.84
CLDN9O95484 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.54□□□□□ -1.84
CLDN9O95484 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.54□□□□□ -1.84
CLDN9O95484 HIGD1AP3-201ENST00000515857 278 ntBASIC3.54□□□□□ -1.84
CLDN9O95484 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.54□□□□□ -1.84
CLDN9O95484 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.54□□□□□ -1.84
CLDN9O95484 OR4C2P-201ENST00000530855 1064 ntBASIC3.54□□□□□ -1.84
CLDN9O95484 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.54□□□□□ -1.84
CLDN9O95484 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.54□□□□□ -1.84
CLDN9O95484 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.54□□□□□ -1.84
CLDN9O95484 AC104229.1-201ENST00000561364 255 ntBASIC3.54□□□□□ -1.84
CLDN9O95484 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.54□□□□□ -1.84
CLDN9O95484 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.54□□□□□ -1.84
CLDN9O95484 AC008687.2-201ENST00000597865 520 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms