Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 TATDN1P1-201ENST00000414123 891 ntBASIC3□□□□□ -1.93
UPK1BO75841 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3□□□□□ -1.93
UPK1BO75841 MTND2P16-201ENST00000419987 799 ntBASIC3□□□□□ -1.93
UPK1BO75841 CNOT7P1-201ENST00000429006 852 ntBASIC3□□□□□ -1.93
UPK1BO75841 PTP4A1P3-201ENST00000433661 420 ntBASIC3□□□□□ -1.93
UPK1BO75841 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3□□□□□ -1.93
UPK1BO75841 RPS26P30-201ENST00000443431 335 ntBASIC3□□□□□ -1.93
UPK1BO75841 AC239367.2-201ENST00000447309 705 ntBASIC3□□□□□ -1.93
UPK1BO75841 AC008264.1-201ENST00000447612 367 ntBASIC3□□□□□ -1.93
UPK1BO75841 AC097262.1-201ENST00000452559 548 ntBASIC3□□□□□ -1.93
UPK1BO75841 AC008280.2-201ENST00000455473 307 ntBASIC3□□□□□ -1.93
UPK1BO75841 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3□□□□□ -1.93
UPK1BO75841 AC023598.1-201ENST00000472521 361 ntBASIC3□□□□□ -1.93
UPK1BO75841 TMED11P-201ENST00000479478 690 ntBASIC3□□□□□ -1.93
UPK1BO75841 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3□□□□□ -1.93
UPK1BO75841 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3□□□□□ -1.93
UPK1BO75841 RPL23AP55-201ENST00000498163 452 ntBASIC3□□□□□ -1.93
UPK1BO75841 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3□□□□□ -1.93
UPK1BO75841 AC008885.2-201ENST00000509506 930 ntBASIC3□□□□□ -1.93
UPK1BO75841 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3□□□□□ -1.93
UPK1BO75841 RN7SKP244-201ENST00000516513 307 ntBASIC3□□□□□ -1.93
UPK1BO75841 AP001207.2-201ENST00000519490 539 ntBASIC3□□□□□ -1.93
UPK1BO75841 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3□□□□□ -1.93
UPK1BO75841 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3□□□□□ -1.93
UPK1BO75841 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3□□□□□ -1.93
UPK1BO75841 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3□□□□□ -1.93
UPK1BO75841 OR4T1P-201ENST00000554933 911 ntBASIC3□□□□□ -1.93
UPK1BO75841 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3□□□□□ -1.93
UPK1BO75841 MIR4489-201ENST00000578869 62 ntBASIC3□□□□□ -1.93
UPK1BO75841 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3□□□□□ -1.93
UPK1BO75841 AC091488.1-201ENST00000604239 660 ntBASIC3□□□□□ -1.93
UPK1BO75841 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
UPK1BO75841 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3□□□□□ -1.93
UPK1BO75841 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3□□□□□ -1.93
UPK1BO75841 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
UPK1BO75841 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
UPK1BO75841 CASC19-261ENST00000641853 1638 ntBASIC3□□□□□ -1.93
UPK1BO75841 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3□□□□□ -1.93
UPK1BO75841 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
UPK1BO75841 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
UPK1BO75841 MFSD8-233ENST00000641482 4860 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
UPK1BO75841 OR4A15-201ENST00000314706 1035 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 RNA5SP507-201ENST00000363603 121 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 RNA5SP27-201ENST00000363839 119 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
UPK1BO75841 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
UPK1BO75841 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.99□□□□□ -1.93
UPK1BO75841 RNU6-796P-201ENST00000391086 107 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
UPK1BO75841 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
UPK1BO75841 AL035419.1-201ENST00000397037 564 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 ZNF602P-201ENST00000405929 924 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 ATF1P1-201ENST00000406040 927 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.99□□□□□ -1.93
UPK1BO75841 AC011933.1-201ENST00000413334 321 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 TOMM22P1-201ENST00000418578 312 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 AC244098.2-201ENST00000422068 99 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.99□□□□□ -1.93
UPK1BO75841 ETF1P3-201ENST00000430422 1160 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 ZFAND6P1-201ENST00000434138 605 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC2.99□□□□□ -1.93
UPK1BO75841 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 RPS15AP29-201ENST00000445539 400 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC2.99□□□□□ -1.93
UPK1BO75841 CYCSP42-201ENST00000450823 238 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 RPS3AP53-201ENST00000454716 778 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 AC116533.1-201ENST00000459748 321 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 AC091179.1-201ENST00000461606 579 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 RPS3AP41-201ENST00000462701 778 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.99□□□□□ -1.93
UPK1BO75841 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.99□□□□□ -1.93
UPK1BO75841 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.99□□□□□ -1.93
UPK1BO75841 AC147055.3-201ENST00000510547 851 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 AC023141.12-201ENST00000512399 199 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC2.99□□□□□ -1.93
UPK1BO75841 RNU6-202P-201ENST00000515998 96 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 RNA5SP34-201ENST00000516887 130 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 LECT2-205ENST00000522943 574 ntTSL 3 BASIC2.99□□□□□ -1.93
UPK1BO75841 AC009643.1-201ENST00000532030 391 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.99□□□□□ -1.93
UPK1BO75841 HMGN2P6-201ENST00000551091 273 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 PCNPP1-201ENST00000552501 511 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC2.99□□□□□ -1.93
UPK1BO75841 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.99□□□□□ -1.93
UPK1BO75841 AC027104.1-201ENST00000563702 681 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 MIR4310-201ENST00000582950 57 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
UPK1BO75841 SNRPGP15-201ENST00000600149 222 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 SNORA51-201ENST00000606420 132 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 AC112200.1-201ENST00000625015 234 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 AC017104.5-201ENST00000637647 639 ntBASIC2.99□□□□□ -1.93
UPK1BO75841 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
UPK1BO75841 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.99□□□□□ -1.93
UPK1BO75841 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
UPK1BO75841 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
UPK1BO75841 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
UPK1BO75841 MIR383-201ENST00000362257 73 ntBASIC2.98□□□□□ -1.93
UPK1BO75841 RNA5SP44-201ENST00000410446 133 ntBASIC2.98□□□□□ -1.93
UPK1BO75841 RN7SKP53-201ENST00000411337 315 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 184.1 ms