Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 RPL7P4-203ENST00000430239 730 ntBASIC4□□□□□ -1.77
CLDN3O15551 AC010655.1-201ENST00000449336 292 ntBASIC4□□□□□ -1.77
CLDN3O15551 DNAJC19P8-201ENST00000452887 259 ntBASIC4□□□□□ -1.77
CLDN3O15551 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4□□□□□ -1.77
CLDN3O15551 AC099563.1-201ENST00000456086 418 ntBASIC4□□□□□ -1.77
CLDN3O15551 AC010307.1-201ENST00000467206 836 ntBASIC4□□□□□ -1.77
CLDN3O15551 RPL21P129-201ENST00000491732 478 ntBASIC4□□□□□ -1.77
CLDN3O15551 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4□□□□□ -1.77
CLDN3O15551 RN7SKP18-201ENST00000516005 275 ntBASIC4□□□□□ -1.77
CLDN3O15551 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4□□□□□ -1.77
CLDN3O15551 OR8L1P-201ENST00000534005 955 ntBASIC4□□□□□ -1.77
CLDN3O15551 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4□□□□□ -1.77
CLDN3O15551 ATP5F1P7-201ENST00000567330 760 ntBASIC4□□□□□ -1.77
CLDN3O15551 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4□□□□□ -1.77
CLDN3O15551 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4□□□□□ -1.77
CLDN3O15551 FRG1HP-204ENST00000617940 757 ntBASIC4□□□□□ -1.77
CLDN3O15551 AP003400.6-201ENST00000624698 740 ntBASIC4□□□□□ -1.77
CLDN3O15551 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4□□□□□ -1.77
CLDN3O15551 AL034408.1-202ENST00000636088 415 ntBASIC4□□□□□ -1.77
CLDN3O15551 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CLDN3O15551 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4□□□□□ -1.77
CLDN3O15551 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4□□□□□ -1.77
CLDN3O15551 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
CLDN3O15551 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4□□□□□ -1.77
CLDN3O15551 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CLDN3O15551 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLDN3O15551 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.99□□□□□ -1.77
CLDN3O15551 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CLDN3O15551 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLDN3O15551 RNU1-85P-201ENST00000364127 164 ntBASIC3.99□□□□□ -1.77
CLDN3O15551 SNORA73.2-201ENST00000364946 201 ntBASIC3.99□□□□□ -1.77
CLDN3O15551 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.99□□□□□ -1.77
CLDN3O15551 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLDN3O15551 SYF2P2-201ENST00000417620 583 ntBASIC3.99□□□□□ -1.77
CLDN3O15551 AC073310.1-201ENST00000423226 1033 ntBASIC3.99□□□□□ -1.77
CLDN3O15551 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.99□□□□□ -1.77
CLDN3O15551 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.99□□□□□ -1.77
CLDN3O15551 CKS1BP5-201ENST00000434172 273 ntBASIC3.99□□□□□ -1.77
CLDN3O15551 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CLDN3O15551 AL645931.1-201ENST00000439737 410 ntBASIC3.99□□□□□ -1.77
CLDN3O15551 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.99□□□□□ -1.77
CLDN3O15551 AC044797.1-201ENST00000445744 679 ntBASIC3.99□□□□□ -1.77
CLDN3O15551 RPS20P32-201ENST00000456044 356 ntBASIC3.99□□□□□ -1.77
CLDN3O15551 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.99□□□□□ -1.77
CLDN3O15551 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.99□□□□□ -1.77
CLDN3O15551 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLDN3O15551 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.99□□□□□ -1.77
CLDN3O15551 AC106872.2-201ENST00000494303 480 ntBASIC3.99□□□□□ -1.77
CLDN3O15551 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.99□□□□□ -1.77
CLDN3O15551 AC008885.2-201ENST00000509506 930 ntBASIC3.99□□□□□ -1.77
CLDN3O15551 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.99□□□□□ -1.77
CLDN3O15551 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.99□□□□□ -1.77
CLDN3O15551 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.99□□□□□ -1.77
CLDN3O15551 RNU6-1102P-201ENST00000516149 96 ntBASIC3.99□□□□□ -1.77
CLDN3O15551 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CLDN3O15551 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.99□□□□□ -1.77
CLDN3O15551 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.99□□□□□ -1.77
CLDN3O15551 GTF2IP22-201ENST00000554443 182 ntBASIC3.99□□□□□ -1.77
CLDN3O15551 AC141257.3-201ENST00000572906 215 ntBASIC3.99□□□□□ -1.77
CLDN3O15551 AP006248.3-201ENST00000623580 594 ntBASIC3.99□□□□□ -1.77
CLDN3O15551 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.99□□□□□ -1.77
CLDN3O15551 AC119674.1-207ENST00000641355 633 ntBASIC3.99□□□□□ -1.77
CLDN3O15551 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLDN3O15551 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.99□□□□□ -1.77
CLDN3O15551 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CLDN3O15551 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.98□□□□□ -1.77
CLDN3O15551 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN3O15551 CR381670.1-201ENST00000624291 1693 ntBASIC3.98□□□□□ -1.77
CLDN3O15551 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN3O15551 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLDN3O15551 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.98□□□□□ -1.77
CLDN3O15551 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.98□□□□□ -1.77
CLDN3O15551 AL121882.1-201ENST00000422893 417 ntBASIC3.98□□□□□ -1.77
CLDN3O15551 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.98□□□□□ -1.77
CLDN3O15551 ARL4AP4-201ENST00000434170 518 ntBASIC3.98□□□□□ -1.77
CLDN3O15551 NDUFB1P1-201ENST00000435191 180 ntBASIC3.98□□□□□ -1.77
CLDN3O15551 RPL29P29-201ENST00000448725 423 ntBASIC3.98□□□□□ -1.77
CLDN3O15551 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.98□□□□□ -1.77
CLDN3O15551 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.98□□□□□ -1.77
CLDN3O15551 AC008280.2-201ENST00000455473 307 ntBASIC3.98□□□□□ -1.77
CLDN3O15551 HMGB3P30-201ENST00000457863 606 ntBASIC3.98□□□□□ -1.77
CLDN3O15551 AC068305.1-201ENST00000497406 726 ntBASIC3.98□□□□□ -1.77
CLDN3O15551 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.98□□□□□ -1.77
CLDN3O15551 SNX5P1-201ENST00000505757 1041 ntBASIC3.98□□□□□ -1.77
CLDN3O15551 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.98□□□□□ -1.77
CLDN3O15551 AC093755.1-201ENST00000512950 1023 ntBASIC3.98□□□□□ -1.77
CLDN3O15551 AC026403.1-201ENST00000518938 295 ntBASIC3.98□□□□□ -1.77
CLDN3O15551 RANP9-201ENST00000519957 271 ntBASIC3.98□□□□□ -1.77
CLDN3O15551 OR4C2P-201ENST00000530855 1064 ntBASIC3.98□□□□□ -1.77
CLDN3O15551 TRAV15-201ENST00000556680 249 ntBASIC3.98□□□□□ -1.77
CLDN3O15551 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.98□□□□□ -1.77
CLDN3O15551 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.98□□□□□ -1.77
CLDN3O15551 AL671309.1-201ENST00000603750 544 ntBASIC3.98□□□□□ -1.77
CLDN3O15551 RNA5SP108-201ENST00000605921 117 ntBASIC3.98□□□□□ -1.77
CLDN3O15551 AC112503.1-201ENST00000608436 391 ntBASIC3.98□□□□□ -1.77
CLDN3O15551 AL732618.1-201ENST00000623251 301 ntBASIC3.98□□□□□ -1.77
CLDN3O15551 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CLDN3O15551 AC092608.3-201ENST00000625017 386 ntBASIC3.98□□□□□ -1.77
CLDN3O15551 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CLDN3O15551 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms