Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.75□□□□□ -1.97
SDCBPO00560 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.75□□□□□ -1.97
SDCBPO00560 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.75□□□□□ -1.97
SDCBPO00560 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.75□□□□□ -1.97
SDCBPO00560 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.75□□□□□ -1.97
SDCBPO00560 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.75□□□□□ -1.97
SDCBPO00560 AL162713.1-201ENST00000604480 262 ntBASIC2.75□□□□□ -1.97
SDCBPO00560 AL591516.1-201ENST00000611326 274 ntBASIC2.75□□□□□ -1.97
SDCBPO00560 RMST_5.1-201ENST00000618704 126 ntBASIC2.75□□□□□ -1.97
SDCBPO00560 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.75□□□□□ -1.97
SDCBPO00560 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC2.75□□□□□ -1.97
SDCBPO00560 AC012442.3-202ENST00000636742 206 ntBASIC2.75□□□□□ -1.97
SDCBPO00560 AL356274.2-201ENST00000624379 3752 ntBASIC2.75□□□□□ -1.97
SDCBPO00560 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SDCBPO00560 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SDCBPO00560 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SDCBPO00560 AC138393.1-206ENST00000540997 1886 ntBASIC2.75□□□□□ -1.97
SDCBPO00560 POMP-202ENST00000460403 1428 ntTSL 3 BASIC2.75□□□□□ -1.97
SDCBPO00560 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.75□□□□□ -1.97
SDCBPO00560 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SDCBPO00560 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.74□□□□□ -1.97
SDCBPO00560 DCAF13P1-201ENST00000495256 1330 ntBASIC2.74□□□□□ -1.97
SDCBPO00560 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
SDCBPO00560 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SDCBPO00560 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SDCBPO00560 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SDCBPO00560 RNA5SP119-201ENST00000362715 117 ntBASIC2.74□□□□□ -1.97
SDCBPO00560 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
SDCBPO00560 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SDCBPO00560 RPL21P3-201ENST00000395517 478 ntBASIC2.74□□□□□ -1.97
SDCBPO00560 AL356967.1-201ENST00000406305 431 ntBASIC2.74□□□□□ -1.97
SDCBPO00560 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.74□□□□□ -1.97
SDCBPO00560 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.74□□□□□ -1.97
SDCBPO00560 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.74□□□□□ -1.97
SDCBPO00560 RNU2-65P-201ENST00000410162 185 ntBASIC2.74□□□□□ -1.97
SDCBPO00560 AC007390.1-201ENST00000415722 356 ntBASIC2.74□□□□□ -1.97
SDCBPO00560 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SDCBPO00560 AC091286.1-201ENST00000431233 461 ntBASIC2.74□□□□□ -1.97
SDCBPO00560 HMGN2P31-201ENST00000432430 273 ntBASIC2.74□□□□□ -1.97
SDCBPO00560 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.74□□□□□ -1.97
SDCBPO00560 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC2.74□□□□□ -1.97
SDCBPO00560 CCRL1P1-201ENST00000449542 1053 ntBASIC2.74□□□□□ -1.97
SDCBPO00560 AC146507.2-201ENST00000460608 476 ntBASIC2.74□□□□□ -1.97
SDCBPO00560 SNRPGP3-201ENST00000469405 227 ntBASIC2.74□□□□□ -1.97
SDCBPO00560 ST13P14-201ENST00000474095 734 ntBASIC2.74□□□□□ -1.97
SDCBPO00560 AC093278.1-201ENST00000494700 600 ntBASIC2.74□□□□□ -1.97
SDCBPO00560 AC023050.1-201ENST00000498198 304 ntBASIC2.74□□□□□ -1.97
SDCBPO00560 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC2.74□□□□□ -1.97
SDCBPO00560 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.74□□□□□ -1.97
SDCBPO00560 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SDCBPO00560 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC2.74□□□□□ -1.97
SDCBPO00560 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.74□□□□□ -1.97
SDCBPO00560 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.74□□□□□ -1.97
SDCBPO00560 MIR5186-201ENST00000577504 120 ntBASIC2.74□□□□□ -1.97
SDCBPO00560 MIR4276-201ENST00000584832 70 ntBASIC2.74□□□□□ -1.97
SDCBPO00560 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.74□□□□□ -1.97
SDCBPO00560 AC239803.2-201ENST00000610161 430 ntBASIC2.74□□□□□ -1.97
SDCBPO00560 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.74□□□□□ -1.97
SDCBPO00560 XIST_intron.1-201ENST00000619444 68 ntBASIC2.74□□□□□ -1.97
SDCBPO00560 AL161637.1-201ENST00000622380 412 ntBASIC2.74□□□□□ -1.97
SDCBPO00560 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
SDCBPO00560 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SDCBPO00560 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SDCBPO00560 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SDCBPO00560 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.73□□□□□ -1.97
SDCBPO00560 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.73□□□□□ -1.97
SDCBPO00560 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
SDCBPO00560 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SDCBPO00560 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
SDCBPO00560 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.73□□□□□ -1.97
SDCBPO00560 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
SDCBPO00560 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.73□□□□□ -1.97
SDCBPO00560 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.73□□□□□ -1.97
SDCBPO00560 RPL21P133-201ENST00000443666 476 ntBASIC2.73□□□□□ -1.97
SDCBPO00560 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.73□□□□□ -1.97
SDCBPO00560 AC020898.1-201ENST00000474167 787 ntBASIC2.73□□□□□ -1.97
SDCBPO00560 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.73□□□□□ -1.97
SDCBPO00560 AC092185.1-201ENST00000491371 97 ntBASIC2.73□□□□□ -1.97
SDCBPO00560 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.73□□□□□ -1.97
SDCBPO00560 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.73□□□□□ -1.97
SDCBPO00560 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.73□□□□□ -1.97
SDCBPO00560 SNORD116-30-201ENST00000516468 85 ntBASIC2.73□□□□□ -1.97
SDCBPO00560 Vault.1-201ENST00000516474 102 ntBASIC2.73□□□□□ -1.97
SDCBPO00560 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.73□□□□□ -1.97
SDCBPO00560 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.73□□□□□ -1.97
SDCBPO00560 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC2.73□□□□□ -1.97
SDCBPO00560 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.73□□□□□ -1.97
SDCBPO00560 MIR3922-201ENST00000585192 84 ntBASIC2.73□□□□□ -1.97
SDCBPO00560 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SDCBPO00560 AL589935.2-201ENST00000616471 1231 ntBASIC2.73□□□□□ -1.97
SDCBPO00560 AC034229.5-201ENST00000624258 185 ntBASIC2.73□□□□□ -1.97
SDCBPO00560 AC092159.4-201ENST00000624944 550 ntBASIC2.73□□□□□ -1.97
SDCBPO00560 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.73□□□□□ -1.97
SDCBPO00560 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
SDCBPO00560 AC092326.2-201ENST00000624772 1561 ntBASIC2.73□□□□□ -1.97
SDCBPO00560 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SDCBPO00560 AP001148.1-201ENST00000624124 2359 ntBASIC2.73□□□□□ -1.97
SDCBPO00560 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
SDCBPO00560 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
SDCBPO00560 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms