Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.74□□□□□ -1.81
PDLIM1O00151 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PDLIM1O00151 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PDLIM1O00151 MIR383-201ENST00000362257 73 ntBASIC3.74□□□□□ -1.81
PDLIM1O00151 RNA5SP391-201ENST00000363456 119 ntBASIC3.74□□□□□ -1.81
PDLIM1O00151 RNU6-805P-201ENST00000365643 106 ntBASIC3.74□□□□□ -1.81
PDLIM1O00151 SNORA51.12-201ENST00000384448 134 ntBASIC3.74□□□□□ -1.81
PDLIM1O00151 MIR153-1-201ENST00000384914 90 ntBASIC3.74□□□□□ -1.81
PDLIM1O00151 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.74□□□□□ -1.81
PDLIM1O00151 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PDLIM1O00151 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.74□□□□□ -1.81
PDLIM1O00151 AC013262.1-201ENST00000426710 252 ntBASIC3.74□□□□□ -1.81
PDLIM1O00151 RSL24D1P6-201ENST00000426934 401 ntBASIC3.74□□□□□ -1.81
PDLIM1O00151 MTND5P27-201ENST00000428871 1720 ntBASIC3.74□□□□□ -1.81
PDLIM1O00151 AL358472.1-201ENST00000431295 329 ntBASIC3.74□□□□□ -1.81
PDLIM1O00151 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.74□□□□□ -1.81
PDLIM1O00151 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.74□□□□□ -1.81
PDLIM1O00151 FABP5P3-201ENST00000437960 408 ntBASIC3.74□□□□□ -1.81
PDLIM1O00151 AC004865.1-201ENST00000442276 1003 ntBASIC3.74□□□□□ -1.81
PDLIM1O00151 AC006011.1-201ENST00000442758 349 ntBASIC3.74□□□□□ -1.81
PDLIM1O00151 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.74□□□□□ -1.81
PDLIM1O00151 NUTF2P3-201ENST00000448540 384 ntBASIC3.74□□□□□ -1.81
PDLIM1O00151 DNAJC19P1-201ENST00000455312 319 ntBASIC3.74□□□□□ -1.81
PDLIM1O00151 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PDLIM1O00151 RPL21P18-201ENST00000469899 480 ntBASIC3.74□□□□□ -1.81
PDLIM1O00151 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.74□□□□□ -1.81
PDLIM1O00151 AC105137.1-201ENST00000484355 562 ntBASIC3.74□□□□□ -1.81
PDLIM1O00151 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.74□□□□□ -1.81
PDLIM1O00151 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.74□□□□□ -1.81
PDLIM1O00151 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.74□□□□□ -1.81
PDLIM1O00151 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.74□□□□□ -1.81
PDLIM1O00151 AC112198.4-201ENST00000515450 351 ntBASIC3.74□□□□□ -1.81
PDLIM1O00151 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.74□□□□□ -1.81
PDLIM1O00151 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.74□□□□□ -1.81
PDLIM1O00151 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.74□□□□□ -1.81
PDLIM1O00151 AC138701.1-201ENST00000524329 714 ntBASIC3.74□□□□□ -1.81
PDLIM1O00151 AP001636.2-201ENST00000525517 696 ntBASIC3.74□□□□□ -1.81
PDLIM1O00151 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.74□□□□□ -1.81
PDLIM1O00151 AC006518.1-201ENST00000541449 943 ntBASIC3.74□□□□□ -1.81
PDLIM1O00151 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.74□□□□□ -1.81
PDLIM1O00151 MIR4738-201ENST00000579134 87 ntBASIC3.74□□□□□ -1.81
PDLIM1O00151 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.74□□□□□ -1.81
PDLIM1O00151 AC006116.5-201ENST00000591936 559 ntBASIC3.74□□□□□ -1.81
PDLIM1O00151 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.74□□□□□ -1.81
PDLIM1O00151 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.74□□□□□ -1.81
PDLIM1O00151 BNIP3P4-201ENST00000604946 565 ntBASIC3.74□□□□□ -1.81
PDLIM1O00151 BRDTP1-201ENST00000605735 677 ntBASIC3.74□□□□□ -1.81
PDLIM1O00151 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PDLIM1O00151 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.74□□□□□ -1.81
PDLIM1O00151 AL590396.4-201ENST00000636779 956 ntBASIC3.74□□□□□ -1.81
PDLIM1O00151 NSRP1P1-201ENST00000444067 1693 ntBASIC3.74□□□□□ -1.81
PDLIM1O00151 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PDLIM1O00151 LARP1BP1-201ENST00000506036 1359 ntBASIC3.74□□□□□ -1.81
PDLIM1O00151 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.74□□□□□ -1.81
PDLIM1O00151 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.74□□□□□ -1.81
PDLIM1O00151 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
PDLIM1O00151 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.73□□□□□ -1.81
PDLIM1O00151 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PDLIM1O00151 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PDLIM1O00151 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PDLIM1O00151 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.73□□□□□ -1.81
PDLIM1O00151 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.73□□□□□ -1.81
PDLIM1O00151 RNU6-207P-201ENST00000384137 107 ntBASIC3.73□□□□□ -1.81
PDLIM1O00151 AL035405.1-201ENST00000400795 710 ntBASIC3.73□□□□□ -1.81
PDLIM1O00151 AL049693.1-201ENST00000402760 611 ntBASIC3.73□□□□□ -1.81
PDLIM1O00151 AL391417.1-201ENST00000404100 426 ntBASIC3.73□□□□□ -1.81
PDLIM1O00151 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
PDLIM1O00151 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.73□□□□□ -1.81
PDLIM1O00151 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.73□□□□□ -1.81
PDLIM1O00151 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.73□□□□□ -1.81
PDLIM1O00151 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.73□□□□□ -1.81
PDLIM1O00151 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.73□□□□□ -1.81
PDLIM1O00151 AC091390.1-201ENST00000433904 331 ntBASIC3.73□□□□□ -1.81
PDLIM1O00151 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.73□□□□□ -1.81
PDLIM1O00151 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.73□□□□□ -1.81
PDLIM1O00151 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.73□□□□□ -1.81
PDLIM1O00151 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.73□□□□□ -1.81
PDLIM1O00151 RPS27AP13-201ENST00000498403 237 ntBASIC3.73□□□□□ -1.81
PDLIM1O00151 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.73□□□□□ -1.81
PDLIM1O00151 AC021146.5-201ENST00000503544 545 ntBASIC3.73□□□□□ -1.81
PDLIM1O00151 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.73□□□□□ -1.81
PDLIM1O00151 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.73□□□□□ -1.81
PDLIM1O00151 AC005351.1-201ENST00000511152 786 ntBASIC3.73□□□□□ -1.81
PDLIM1O00151 AC099522.1-202ENST00000514718 367 ntBASIC3.73□□□□□ -1.81
PDLIM1O00151 RN7SKP83-201ENST00000516512 178 ntBASIC3.73□□□□□ -1.81
PDLIM1O00151 RN7SKP289-201ENST00000517244 295 ntBASIC3.73□□□□□ -1.81
PDLIM1O00151 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.73□□□□□ -1.81
PDLIM1O00151 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.73□□□□□ -1.81
PDLIM1O00151 AC104115.2-201ENST00000523026 687 ntBASIC3.73□□□□□ -1.81
PDLIM1O00151 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.73□□□□□ -1.81
PDLIM1O00151 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.73□□□□□ -1.81
PDLIM1O00151 AC025884.1-201ENST00000556034 378 ntBASIC3.73□□□□□ -1.81
PDLIM1O00151 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
PDLIM1O00151 MIR4697-201ENST00000582977 78 ntBASIC3.73□□□□□ -1.81
PDLIM1O00151 AC068620.3-201ENST00000602749 560 ntBASIC3.73□□□□□ -1.81
PDLIM1O00151 AP002906.1-201ENST00000603405 233 ntBASIC3.73□□□□□ -1.81
PDLIM1O00151 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.73□□□□□ -1.81
PDLIM1O00151 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
PDLIM1O00151 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
PDLIM1O00151 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms