Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL645939.1-201ENST00000453429 797 ntBASIC4.1□□□□□ -1.75
CCDC188H7C350 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC188H7C350 AC111000.3-201ENST00000508057 576 ntBASIC4.1□□□□□ -1.75
CCDC188H7C350 AC093752.1-206ENST00000511823 336 ntBASIC4.1□□□□□ -1.75
CCDC188H7C350 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC188H7C350 AC091163.3-201ENST00000518269 1144 ntBASIC4.1□□□□□ -1.75
CCDC188H7C350 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC188H7C350 AC008802.1-201ENST00000519121 791 ntBASIC4.1□□□□□ -1.75
CCDC188H7C350 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC188H7C350 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC188H7C350 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC188H7C350 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC188H7C350 DEFB130C-202ENST00000530001 230 ntBASIC4.1□□□□□ -1.75
CCDC188H7C350 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC188H7C350 AC137768.1-201ENST00000549998 553 ntBASIC4.1□□□□□ -1.75
CCDC188H7C350 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC188H7C350 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.1□□□□□ -1.75
CCDC188H7C350 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC188H7C350 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC188H7C350 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.1□□□□□ -1.75
CCDC188H7C350 AC005255.1-201ENST00000593748 216 ntBASIC4.1□□□□□ -1.75
CCDC188H7C350 AC112230.1-201ENST00000604342 547 ntBASIC4.1□□□□□ -1.75
CCDC188H7C350 BRDTP1-201ENST00000605735 677 ntBASIC4.1□□□□□ -1.75
CCDC188H7C350 AL592148.2-201ENST00000612210 372 ntBASIC4.1□□□□□ -1.75
CCDC188H7C350 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC188H7C350 AC068722.2-201ENST00000618734 544 ntBASIC4.1□□□□□ -1.75
CCDC188H7C350 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC188H7C350 AL139089.1-201ENST00000620372 975 ntBASIC4.1□□□□□ -1.75
CCDC188H7C350 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CCDC188H7C350 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC188H7C350 MTND5P31-201ENST00000419366 1374 ntBASIC4.1□□□□□ -1.75
CCDC188H7C350 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
CCDC188H7C350 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC188H7C350 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC188H7C350 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CCDC188H7C350 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC188H7C350 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC188H7C350 AC000367.1-201ENST00000452711 1766 ntBASIC4.09□□□□□ -1.75
CCDC188H7C350 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC188H7C350 RNA5SP399-201ENST00000364003 117 ntBASIC4.09□□□□□ -1.75
CCDC188H7C350 RNVU1-6-201ENST00000364688 164 ntBASIC4.09□□□□□ -1.75
CCDC188H7C350 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC188H7C350 RNU6-1226P-201ENST00000384317 107 ntBASIC4.09□□□□□ -1.75
CCDC188H7C350 RNU6-921P-201ENST00000384361 107 ntBASIC4.09□□□□□ -1.75
CCDC188H7C350 AL355379.1-201ENST00000405542 640 ntBASIC4.09□□□□□ -1.75
CCDC188H7C350 RPS16P5-201ENST00000406501 404 ntBASIC4.09□□□□□ -1.75
CCDC188H7C350 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC188H7C350 HSPE1P12-201ENST00000412576 301 ntBASIC4.09□□□□□ -1.75
CCDC188H7C350 MTND4P22-201ENST00000413116 1169 ntBASIC4.09□□□□□ -1.75
CCDC188H7C350 AC011933.1-201ENST00000413334 321 ntBASIC4.09□□□□□ -1.75
CCDC188H7C350 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.09□□□□□ -1.75
CCDC188H7C350 AC069213.2-201ENST00000420238 366 ntBASIC4.09□□□□□ -1.75
CCDC188H7C350 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC188H7C350 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC188H7C350 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC188H7C350 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC188H7C350 EIF2S2P2-201ENST00000447161 982 ntBASIC4.09□□□□□ -1.75
CCDC188H7C350 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC188H7C350 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
CCDC188H7C350 snoU109.3-201ENST00000459477 145 ntBASIC4.09□□□□□ -1.75
CCDC188H7C350 AC116533.1-201ENST00000459748 321 ntBASIC4.09□□□□□ -1.75
CCDC188H7C350 AP000893.1-201ENST00000474462 794 ntBASIC4.09□□□□□ -1.75
CCDC188H7C350 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CCDC188H7C350 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC188H7C350 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CCDC188H7C350 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC188H7C350 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.09□□□□□ -1.75
CCDC188H7C350 RN7SKP83-201ENST00000516512 178 ntBASIC4.09□□□□□ -1.75
CCDC188H7C350 RN7SKP209-201ENST00000516888 304 ntBASIC4.09□□□□□ -1.75
CCDC188H7C350 SUMO2P20-201ENST00000520803 283 ntBASIC4.09□□□□□ -1.75
CCDC188H7C350 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.09□□□□□ -1.75
CCDC188H7C350 OR4C2P-201ENST00000530855 1064 ntBASIC4.09□□□□□ -1.75
CCDC188H7C350 AC092851.1-201ENST00000535964 478 ntBASIC4.09□□□□□ -1.75
CCDC188H7C350 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.09□□□□□ -1.75
CCDC188H7C350 OR6C73P-201ENST00000546432 358 ntBASIC4.09□□□□□ -1.75
CCDC188H7C350 AC091516.1-201ENST00000549191 703 ntBASIC4.09□□□□□ -1.75
CCDC188H7C350 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC188H7C350 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC188H7C350 AC069431.2-201ENST00000604149 1099 ntBASIC4.09□□□□□ -1.75
CCDC188H7C350 AC098679.5-201ENST00000624394 571 ntBASIC4.09□□□□□ -1.75
CCDC188H7C350 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC188H7C350 RPS4XP5-202ENST00000449995 1334 ntBASIC4.09□□□□□ -1.75
CCDC188H7C350 OR11H5P-202ENST00000641612 1325 ntBASIC4.09□□□□□ -1.75
CCDC188H7C350 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC188H7C350 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC188H7C350 DBF4P1-201ENST00000412976 1892 ntBASIC4.09□□□□□ -1.76
CCDC188H7C350 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC188H7C350 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC188H7C350 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC188H7C350 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC188H7C350 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC188H7C350 RNVU1-3-201ENST00000364313 161 ntBASIC4.08□□□□□ -1.76
CCDC188H7C350 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC188H7C350 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CCDC188H7C350 MIR122-201ENST00000385044 85 ntBASIC4.08□□□□□ -1.76
CCDC188H7C350 AL161909.1-201ENST00000397390 712 ntBASIC4.08□□□□□ -1.76
CCDC188H7C350 RPS4XP9-201ENST00000405151 780 ntBASIC4.08□□□□□ -1.76
CCDC188H7C350 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC188H7C350 AL136133.1-201ENST00000413694 376 ntBASIC4.08□□□□□ -1.76
CCDC188H7C350 AC027644.1-201ENST00000419595 298 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms