Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC104986.1-201ENST00000517978 436 ntBASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 IGLV3-30-201ENST00000524362 298 ntBASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 AL355598.1-201ENST00000604169 202 ntBASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 MRE11P1-201ENST00000464884 2127 ntBASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 AC092070.2-203ENST00000598377 3644 ntBASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 ASNSP3-201ENST00000451989 1306 ntBASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 SAMMSON-210ENST00000641260 1308 ntBASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ZC3H4Q9UPT8 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 RNU1-106P-201ENST00000384382 164 ntBASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 AC245028.1-201ENST00000423259 256 ntBASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 CEACAMP9-201ENST00000442990 513 ntBASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 AL590639.1-201ENST00000456484 337 ntBASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 SLC25A51P1-201ENST00000468432 871 ntBASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 AC108471.1-201ENST00000513977 287 ntBASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 RNU6-410P-201ENST00000517006 107 ntBASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 Y_RNA.718-201ENST00000517110 102 ntBASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 IGHV1-14-201ENST00000523391 241 ntBASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 DERA-209ENST00000532964 854 ntTSL 5 BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 AC009597.2-201ENST00000604659 592 ntBASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 IGLCOR22-2-201ENST00000605398 313 ntBASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 AL391813.2-201ENST00000609113 322 ntBASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 PACRG-210ENST00000611387 279 ntTSL 5 BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 AC091925.1-201ENST00000623204 462 ntBASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 AL355488.2-201ENST00000609909 2850 ntBASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ZC3H4Q9UPT8 AC011155.1-201ENST00000316512 456 ntBASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 RNY4P16-201ENST00000364768 94 ntBASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 SNORD116-29-201ENST00000384516 83 ntBASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 HSPE1P1-201ENST00000421494 318 ntBASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 CYCSP6-201ENST00000434498 302 ntBASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 HMGN3P1-201ENST00000453847 193 ntBASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 APOOP2-201ENST00000461561 539 ntBASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 MTCO2P29-201ENST00000465212 189 ntBASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC7.03□□□□□ -1.28
ZC3H4Q9UPT8 AL163973.1-201ENST00000484753 577 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms