Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RPL7L1P1-201ENST00000448259 785 ntBASIC3.98□□□□□ -1.77
SCN11AQ9UI33 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SCN11AQ9UI33 RNA5SP356-201ENST00000515972 94 ntBASIC3.98□□□□□ -1.77
SCN11AQ9UI33 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.98□□□□□ -1.77
SCN11AQ9UI33 AP001636.2-201ENST00000525517 696 ntBASIC3.98□□□□□ -1.77
SCN11AQ9UI33 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.98□□□□□ -1.77
SCN11AQ9UI33 AC008507.1-201ENST00000587506 734 ntBASIC3.98□□□□□ -1.77
SCN11AQ9UI33 AC068722.2-201ENST00000618734 544 ntBASIC3.98□□□□□ -1.77
SCN11AQ9UI33 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.98□□□□□ -1.77
SCN11AQ9UI33 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SCN11AQ9UI33 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SCN11AQ9UI33 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SCN11AQ9UI33 RIOK3P1-201ENST00000418778 1528 ntBASIC3.98□□□□□ -1.77
SCN11AQ9UI33 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC3.98□□□□□ -1.77
SCN11AQ9UI33 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SCN11AQ9UI33 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
SCN11AQ9UI33 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.97□□□□□ -1.77
SCN11AQ9UI33 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.97□□□□□ -1.77
SCN11AQ9UI33 MIR2276-201ENST00000516886 89 ntBASIC3.97□□□□□ -1.77
SCN11AQ9UI33 AP001207.2-201ENST00000519490 539 ntBASIC3.97□□□□□ -1.77
SCN11AQ9UI33 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SCN11AQ9UI33 TGIF1P1-201ENST00000558095 802 ntBASIC3.97□□□□□ -1.77
SCN11AQ9UI33 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.97□□□□□ -1.77
SCN11AQ9UI33 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.97□□□□□ -1.77
SCN11AQ9UI33 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.97□□□□□ -1.77
SCN11AQ9UI33 AC019080.5-201ENST00000624891 757 ntBASIC3.97□□□□□ -1.77
SCN11AQ9UI33 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SCN11AQ9UI33 AC090971.4-201ENST00000560291 1800 ntBASIC3.97□□□□□ -1.77
SCN11AQ9UI33 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC3.97□□□□□ -1.77
SCN11AQ9UI33 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
SCN11AQ9UI33 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SCN11AQ9UI33 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SCN11AQ9UI33 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
SCN11AQ9UI33 OR1S2-201ENST00000302592 978 ntBASIC3.97□□□□□ -1.77
SCN11AQ9UI33 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SCN11AQ9UI33 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.97□□□□□ -1.77
SCN11AQ9UI33 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.97□□□□□ -1.77
SCN11AQ9UI33 AC005002.1-201ENST00000447458 540 ntBASIC3.97□□□□□ -1.77
SCN11AQ9UI33 AC140076.1-201ENST00000449897 361 ntBASIC3.97□□□□□ -1.77
SCN11AQ9UI33 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.97□□□□□ -1.77
SCN11AQ9UI33 AL133477.1-201ENST00000457472 514 ntBASIC3.97□□□□□ -1.77
SCN11AQ9UI33 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.97□□□□□ -1.77
SCN11AQ9UI33 AC009812.2-201ENST00000517657 457 ntBASIC3.97□□□□□ -1.77
SCN11AQ9UI33 IGLVIV-53-201ENST00000520107 367 ntBASIC3.97□□□□□ -1.77
SCN11AQ9UI33 AL139174.1-201ENST00000531489 886 ntBASIC3.97□□□□□ -1.77
SCN11AQ9UI33 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.97□□□□□ -1.77
SCN11AQ9UI33 AC025946.2-201ENST00000603398 234 ntBASIC3.97□□□□□ -1.77
SCN11AQ9UI33 ATP1B3P1-201ENST00000605365 821 ntBASIC3.97□□□□□ -1.77
SCN11AQ9UI33 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.97□□□□□ -1.77
SCN11AQ9UI33 AL590240.3-201ENST00000621416 943 ntBASIC3.97□□□□□ -1.77
SCN11AQ9UI33 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.97□□□□□ -1.77
SCN11AQ9UI33 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SCN11AQ9UI33 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SCN11AQ9UI33 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SCN11AQ9UI33 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SCN11AQ9UI33 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SCN11AQ9UI33 MIR22-201ENST00000362190 85 ntBASIC3.96□□□□□ -1.78
SCN11AQ9UI33 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SCN11AQ9UI33 HMGB3P11-201ENST00000440127 604 ntBASIC3.96□□□□□ -1.78
SCN11AQ9UI33 AC112653.1-201ENST00000443851 386 ntBASIC3.96□□□□□ -1.78
SCN11AQ9UI33 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.96□□□□□ -1.78
SCN11AQ9UI33 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.96□□□□□ -1.78
SCN11AQ9UI33 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.96□□□□□ -1.78
SCN11AQ9UI33 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.96□□□□□ -1.78
SCN11AQ9UI33 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.96□□□□□ -1.78
SCN11AQ9UI33 AC141257.3-201ENST00000572906 215 ntBASIC3.96□□□□□ -1.78
SCN11AQ9UI33 RPL12P50-201ENST00000603116 116 ntBASIC3.96□□□□□ -1.78
SCN11AQ9UI33 Z82195.1-201ENST00000604558 398 ntBASIC3.96□□□□□ -1.78
SCN11AQ9UI33 AC116158.1-201ENST00000560231 2129 ntBASIC3.96□□□□□ -1.78
SCN11AQ9UI33 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
SCN11AQ9UI33 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SCN11AQ9UI33 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SCN11AQ9UI33 AL353692.2-201ENST00000407054 335 ntBASIC3.95□□□□□ -1.78
SCN11AQ9UI33 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.95□□□□□ -1.78
SCN11AQ9UI33 AC010401.1-201ENST00000463867 348 ntBASIC3.95□□□□□ -1.78
SCN11AQ9UI33 MIR3162-201ENST00000581818 82 ntBASIC3.95□□□□□ -1.78
SCN11AQ9UI33 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
SCN11AQ9UI33 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
SCN11AQ9UI33 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
SCN11AQ9UI33 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.95□□□□□ -1.78
SCN11AQ9UI33 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SCN11AQ9UI33 SNORD15B-201ENST00000384714 146 ntBASIC3.94□□□□□ -1.78
SCN11AQ9UI33 Z98941.1-201ENST00000407764 100 ntBASIC3.94□□□□□ -1.78
SCN11AQ9UI33 RAC1P3-201ENST00000416129 580 ntBASIC3.94□□□□□ -1.78
SCN11AQ9UI33 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.94□□□□□ -1.78
SCN11AQ9UI33 AC002553.2-201ENST00000453217 340 ntBASIC3.94□□□□□ -1.78
SCN11AQ9UI33 PRDX3P4-201ENST00000470828 747 ntBASIC3.94□□□□□ -1.78
SCN11AQ9UI33 S100A11P1-201ENST00000477525 312 ntBASIC3.94□□□□□ -1.78
SCN11AQ9UI33 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.94□□□□□ -1.78
SCN11AQ9UI33 AC073476.4-201ENST00000628409 72 ntBASIC3.94□□□□□ -1.78
SCN11AQ9UI33 AC139713.2-210ENST00000641741 992 ntBASIC3.94□□□□□ -1.78
SCN11AQ9UI33 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.94□□□□□ -1.78
SCN11AQ9UI33 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SCN11AQ9UI33 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.94□□□□□ -1.78
SCN11AQ9UI33 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SCN11AQ9UI33 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SCN11AQ9UI33 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SCN11AQ9UI33 AL031679.1-201ENST00000400616 525 ntBASIC3.94□□□□□ -1.78
SCN11AQ9UI33 NUP35P1-201ENST00000422734 947 ntBASIC3.94□□□□□ -1.78
SCN11AQ9UI33 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms