Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.13□□□□□ -1.43
CNTN3Q9P232 AL513327.3-201ENST00000602618 469 ntBASIC6.13□□□□□ -1.43
CNTN3Q9P232 Z84480.1-201ENST00000605131 311 ntBASIC6.13□□□□□ -1.43
CNTN3Q9P232 AL121655.1-201ENST00000605811 308 ntBASIC6.13□□□□□ -1.43
CNTN3Q9P232 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.13□□□□□ -1.43
CNTN3Q9P232 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC6.13□□□□□ -1.43
CNTN3Q9P232 AC008121.3-201ENST00000618726 433 ntBASIC6.13□□□□□ -1.43
CNTN3Q9P232 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC6.13□□□□□ -1.43
CNTN3Q9P232 AC134503.1-201ENST00000633048 54 ntBASIC6.13□□□□□ -1.43
CNTN3Q9P232 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.13□□□□□ -1.43
CNTN3Q9P232 ZNF652P1-201ENST00000442420 1309 ntBASIC6.13□□□□□ -1.43
CNTN3Q9P232 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CNTN3Q9P232 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC6.13□□□□□ -1.43
CNTN3Q9P232 AC092447.10-201ENST00000620607 1652 ntBASIC6.13□□□□□ -1.43
CNTN3Q9P232 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
CNTN3Q9P232 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC6.13□□□□□ -1.43
CNTN3Q9P232 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.13□□□□□ -1.43
CNTN3Q9P232 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CNTN3Q9P232 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CNTN3Q9P232 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CNTN3Q9P232 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.12□□□□□ -1.43
CNTN3Q9P232 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.12□□□□□ -1.43
CNTN3Q9P232 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.12□□□□□ -1.43
CNTN3Q9P232 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CNTN3Q9P232 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CNTN3Q9P232 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CNTN3Q9P232 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CNTN3Q9P232 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CNTN3Q9P232 AL161781.1-201ENST00000354277 403 ntBASIC6.12□□□□□ -1.43
CNTN3Q9P232 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CNTN3Q9P232 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CNTN3Q9P232 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
CNTN3Q9P232 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CNTN3Q9P232 SNORA51.6-201ENST00000384151 125 ntBASIC6.12□□□□□ -1.43
CNTN3Q9P232 RNU6-441P-201ENST00000384545 106 ntBASIC6.12□□□□□ -1.43
CNTN3Q9P232 MIR606-201ENST00000384851 96 ntBASIC6.12□□□□□ -1.43
CNTN3Q9P232 AL023807.1-201ENST00000407932 359 ntBASIC6.12□□□□□ -1.43
CNTN3Q9P232 RNU2-9P-201ENST00000410194 145 ntBASIC6.12□□□□□ -1.43
CNTN3Q9P232 RN7SKP229-201ENST00000410465 302 ntBASIC6.12□□□□□ -1.43
CNTN3Q9P232 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CNTN3Q9P232 RIOK3P1-201ENST00000418778 1528 ntBASIC6.12□□□□□ -1.43
CNTN3Q9P232 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CNTN3Q9P232 AL133173.1-201ENST00000423458 397 ntBASIC6.12□□□□□ -1.43
CNTN3Q9P232 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC6.12□□□□□ -1.43
CNTN3Q9P232 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC6.12□□□□□ -1.43
CNTN3Q9P232 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.12□□□□□ -1.43
CNTN3Q9P232 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.12□□□□□ -1.43
CNTN3Q9P232 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CNTN3Q9P232 HSPE1P28-201ENST00000443139 211 ntBASIC6.12□□□□□ -1.43
CNTN3Q9P232 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.12□□□□□ -1.43
CNTN3Q9P232 RPL10P17-201ENST00000453852 316 ntBASIC6.12□□□□□ -1.43
CNTN3Q9P232 RPL7P39-201ENST00000481157 744 ntBASIC6.12□□□□□ -1.43
CNTN3Q9P232 RPL23AP41-201ENST00000484754 458 ntBASIC6.12□□□□□ -1.43
CNTN3Q9P232 AC011005.3-201ENST00000491624 395 ntBASIC6.12□□□□□ -1.43
CNTN3Q9P232 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC6.12□□□□□ -1.43
CNTN3Q9P232 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.12□□□□□ -1.43
CNTN3Q9P232 NPM1P41-201ENST00000512920 831 ntBASIC6.12□□□□□ -1.43
CNTN3Q9P232 ATP5LP3-201ENST00000514223 304 ntBASIC6.12□□□□□ -1.43
CNTN3Q9P232 Y_RNA.691-201ENST00000516611 103 ntBASIC6.12□□□□□ -1.43
CNTN3Q9P232 AC090572.1-201ENST00000519251 160 ntBASIC6.12□□□□□ -1.43
CNTN3Q9P232 AC107953.1-201ENST00000522216 297 ntBASIC6.12□□□□□ -1.43
CNTN3Q9P232 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.12□□□□□ -1.43
CNTN3Q9P232 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
CNTN3Q9P232 AC007151.1-201ENST00000572774 483 ntBASIC6.12□□□□□ -1.43
CNTN3Q9P232 LARP7P2-201ENST00000575306 125 ntBASIC6.12□□□□□ -1.43
CNTN3Q9P232 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC6.12□□□□□ -1.43
CNTN3Q9P232 MIR3176-201ENST00000582210 90 ntBASIC6.12□□□□□ -1.43
CNTN3Q9P232 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC6.12□□□□□ -1.43
CNTN3Q9P232 MTND4P35-201ENST00000604257 1375 ntBASIC6.12□□□□□ -1.43
CNTN3Q9P232 AL133481.2-203ENST00000607558 139 ntBASIC6.12□□□□□ -1.43
CNTN3Q9P232 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CNTN3Q9P232 AC022467.1-201ENST00000614738 749 ntBASIC6.12□□□□□ -1.43
CNTN3Q9P232 AL354950.2-201ENST00000617939 290 ntBASIC6.12□□□□□ -1.43
CNTN3Q9P232 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CNTN3Q9P232 AC068831.8-201ENST00000620171 435 ntBASIC6.12□□□□□ -1.43
CNTN3Q9P232 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CNTN3Q9P232 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC6.12□□□□□ -1.43
CNTN3Q9P232 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CNTN3Q9P232 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC6.12□□□□□ -1.43
CNTN3Q9P232 ATM-228ENST00000639240 498 ntTSL 5 BASIC6.12□□□□□ -1.43
CNTN3Q9P232 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CNTN3Q9P232 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CNTN3Q9P232 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
CNTN3Q9P232 AP000756.2-201ENST00000624168 2567 ntBASIC6.12□□□□□ -1.43
CNTN3Q9P232 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CNTN3Q9P232 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CNTN3Q9P232 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CNTN3Q9P232 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
CNTN3Q9P232 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CNTN3Q9P232 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.11□□□□□ -1.43
CNTN3Q9P232 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CNTN3Q9P232 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.11□□□□□ -1.43
CNTN3Q9P232 AC015799.1-201ENST00000622996 3122 ntBASIC6.11□□□□□ -1.43
CNTN3Q9P232 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CNTN3Q9P232 KPNA2P2-201ENST00000419546 1489 ntBASIC6.11□□□□□ -1.43
CNTN3Q9P232 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CNTN3Q9P232 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CNTN3Q9P232 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CNTN3Q9P232 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
CNTN3Q9P232 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms