Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 AC087369.1-201ENST00000520775 996 ntBASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 OR5AK3P-201ENST00000527486 1297 ntBASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 GTF2IP22-201ENST00000554443 182 ntBASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 AC067805.1-201ENST00000559344 470 ntBASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 AC244505.7-201ENST00000599675 272 ntBASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 AL009028.1-201ENST00000604895 802 ntBASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 HMGN2P28-201ENST00000606102 262 ntBASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 U6.107-201ENST00000637108 79 ntBASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.87□□□□□ -1.79
TM9SF3Q9HD45 AP001486.2-201ENST00000561652 5113 ntBASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 AC046144.1-201ENST00000478559 1853 ntBASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 AL512646.1-201ENST00000269395 1077 ntBASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 SNORD115-48-201ENST00000364764 76 ntBASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 TAF9BP2-201ENST00000400856 499 ntBASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 Z98941.1-201ENST00000407764 100 ntBASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 MIR1251-201ENST00000408552 70 ntBASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 SYF2P2-201ENST00000417620 583 ntBASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 AL591419.1-201ENST00000427423 339 ntBASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 UBE2V1P1-201ENST00000430836 445 ntBASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 RPL23AP83-201ENST00000434984 473 ntBASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 RPL21P104-201ENST00000464143 478 ntBASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 RPS4XP13-201ENST00000483219 789 ntBASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 AC139103.1-201ENST00000534696 1030 ntBASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 AC022968.1-201ENST00000567372 442 ntBASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 SNRPGP15-201ENST00000600149 222 ntBASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 MRPS35P3-201ENST00000603189 709 ntBASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 YWHAQP7-201ENST00000603536 658 ntBASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 AC007566.2-201ENST00000603642 413 ntBASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 AC012468.1-201ENST00000604888 430 ntBASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 AC006023.2-201ENST00000609916 167 ntBASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 AC005156.1-201ENST00000613371 573 ntBASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 U6.98-201ENST00000637157 84 ntBASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 RPS4XP5-202ENST00000449995 1334 ntBASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.86□□□□□ -1.79
TM9SF3Q9HD45 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 RNU6-600P-201ENST00000362524 99 ntBASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 SNORD3H-201ENST00000384486 214 ntBASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 RPL7AP73-201ENST00000413490 353 ntBASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 AC068533.1-201ENST00000418542 415 ntBASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 OR5AW1P-201ENST00000426334 1006 ntBASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 AL590623.1-201ENST00000427864 105 ntBASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 AC096638.2-201ENST00000434965 711 ntBASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 HMGB1P12-201ENST00000438594 598 ntBASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 AC092809.1-201ENST00000441469 474 ntBASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 MTND3P4-201ENST00000453537 303 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms