Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 Vault.1-201ENST00000516474 102 ntBASIC2.91□□□□□ -1.94
KIAA1549Q9HCM3 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.91□□□□□ -1.94
KIAA1549Q9HCM3 CR383656.14-201ENST00000551951 406 ntBASIC2.91□□□□□ -1.94
KIAA1549Q9HCM3 MIR2682-201ENST00000580305 110 ntBASIC2.91□□□□□ -1.94
KIAA1549Q9HCM3 AL365400.2-201ENST00000605604 902 ntBASIC2.91□□□□□ -1.94
KIAA1549Q9HCM3 AL513477.2-201ENST00000607858 568 ntBASIC2.91□□□□□ -1.94
KIAA1549Q9HCM3 AC110801.1-201ENST00000623590 212 ntBASIC2.91□□□□□ -1.94
KIAA1549Q9HCM3 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.91□□□□□ -1.94
KIAA1549Q9HCM3 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
KIAA1549Q9HCM3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
KIAA1549Q9HCM3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
KIAA1549Q9HCM3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
KIAA1549Q9HCM3 AC092079.1-201ENST00000558620 1985 ntBASIC2.9□□□□□ -1.95
KIAA1549Q9HCM3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
KIAA1549Q9HCM3 SNORA54-201ENST00000384281 123 ntBASIC2.9□□□□□ -1.95
KIAA1549Q9HCM3 SEPT7P2-202ENST00000398921 823 ntBASIC2.9□□□□□ -1.95
KIAA1549Q9HCM3 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.9□□□□□ -1.95
KIAA1549Q9HCM3 MTCO3P31-201ENST00000405526 789 ntBASIC2.9□□□□□ -1.95
KIAA1549Q9HCM3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.9□□□□□ -1.95
KIAA1549Q9HCM3 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.9□□□□□ -1.95
KIAA1549Q9HCM3 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.9□□□□□ -1.95
KIAA1549Q9HCM3 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.9□□□□□ -1.95
KIAA1549Q9HCM3 AC008885.1-201ENST00000514930 301 ntBASIC2.9□□□□□ -1.95
KIAA1549Q9HCM3 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC2.9□□□□□ -1.95
KIAA1549Q9HCM3 AC107934.2-201ENST00000518653 310 ntBASIC2.9□□□□□ -1.95
KIAA1549Q9HCM3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
KIAA1549Q9HCM3 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.9□□□□□ -1.95
KIAA1549Q9HCM3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.9□□□□□ -1.95
KIAA1549Q9HCM3 AL121594.4-201ENST00000556211 1196 ntBASIC2.9□□□□□ -1.95
KIAA1549Q9HCM3 AL845331.3-202ENST00000562856 261 ntBASIC2.9□□□□□ -1.95
KIAA1549Q9HCM3 MTND2P13-201ENST00000577438 1039 ntBASIC2.9□□□□□ -1.95
KIAA1549Q9HCM3 AC017076.1-201ENST00000607613 578 ntBASIC2.9□□□□□ -1.95
KIAA1549Q9HCM3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
KIAA1549Q9HCM3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.95
KIAA1549Q9HCM3 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 MTCO1P45-201ENST00000431457 267 ntBASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 AC022431.1-201ENST00000450941 438 ntBASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 RPL5P24-201ENST00000463742 885 ntBASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 RNU6-943P-201ENST00000516960 98 ntBASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 AL162274.2-201ENST00000614406 332 ntBASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 AC108206.1-201ENST00000570186 4159 ntBASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 SNORA7.4-201ENST00000384249 137 ntBASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 TRAPPC2P10-201ENST00000415662 323 ntBASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 RPL12P46-201ENST00000436610 195 ntBASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 AC006994.1-201ENST00000438212 839 ntBASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 NANOGNBP1-201ENST00000448444 480 ntBASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 IFNWP4-201ENST00000453148 294 ntBASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 TMED11P-201ENST00000479478 690 ntBASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 RN7SKP116-201ENST00000516902 319 ntBASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 AC011602.1-201ENST00000546484 331 ntBASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 AC006557.5-201ENST00000603126 811 ntBASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 AL159169.2-201ENST00000610061 1269 ntBASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
KIAA1549Q9HCM3 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC2.88□□□□□ -1.95
KIAA1549Q9HCM3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.88□□□□□ -1.95
KIAA1549Q9HCM3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
KIAA1549Q9HCM3 RPS7P13-201ENST00000413955 498 ntBASIC2.88□□□□□ -1.95
KIAA1549Q9HCM3 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC2.88□□□□□ -1.95
KIAA1549Q9HCM3 RPS12P23-201ENST00000419579 400 ntBASIC2.88□□□□□ -1.95
KIAA1549Q9HCM3 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC2.88□□□□□ -1.95
KIAA1549Q9HCM3 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC2.88□□□□□ -1.95
KIAA1549Q9HCM3 AC008264.1-201ENST00000447612 367 ntBASIC2.88□□□□□ -1.95
KIAA1549Q9HCM3 RPS3AP14-201ENST00000483907 780 ntBASIC2.88□□□□□ -1.95
KIAA1549Q9HCM3 AP001207.2-201ENST00000519490 539 ntBASIC2.88□□□□□ -1.95
KIAA1549Q9HCM3 IGHVIII-38-1-201ENST00000521454 282 ntBASIC2.88□□□□□ -1.95
KIAA1549Q9HCM3 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC2.88□□□□□ -1.95
KIAA1549Q9HCM3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.88□□□□□ -1.95
KIAA1549Q9HCM3 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
KIAA1549Q9HCM3 UBL5P2-201ENST00000583788 219 ntBASIC2.88□□□□□ -1.95
KIAA1549Q9HCM3 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC2.88□□□□□ -1.95
KIAA1549Q9HCM3 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC2.88□□□□□ -1.95
KIAA1549Q9HCM3 AC015871.2-201ENST00000603605 948 ntBASIC2.88□□□□□ -1.95
KIAA1549Q9HCM3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.88□□□□□ -1.95
KIAA1549Q9HCM3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
KIAA1549Q9HCM3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC2.88□□□□□ -1.95
KIAA1549Q9HCM3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
KIAA1549Q9HCM3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms