Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 RPS11P7-201ENST00000442125 465 ntBASIC5.17□□□□□ -1.58
VPS11Q9H270 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS11Q9H270 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VPS11Q9H270 COX6CP18-201ENST00000448769 222 ntBASIC5.17□□□□□ -1.58
VPS11Q9H270 NIPA2P5-201ENST00000452282 464 ntBASIC5.17□□□□□ -1.58
VPS11Q9H270 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS11Q9H270 NF1P3-201ENST00000457709 450 ntBASIC5.17□□□□□ -1.58
VPS11Q9H270 AC114967.1-201ENST00000504890 259 ntBASIC5.17□□□□□ -1.58
VPS11Q9H270 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS11Q9H270 AC079395.1-201ENST00000510981 262 ntBASIC5.17□□□□□ -1.58
VPS11Q9H270 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS11Q9H270 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS11Q9H270 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS11Q9H270 RNU6-885P-201ENST00000516607 104 ntBASIC5.17□□□□□ -1.58
VPS11Q9H270 AP003072.1-201ENST00000531740 145 ntBASIC5.17□□□□□ -1.58
VPS11Q9H270 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS11Q9H270 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
VPS11Q9H270 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS11Q9H270 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS11Q9H270 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS11Q9H270 AC012146.2-201ENST00000576545 416 ntBASIC5.17□□□□□ -1.58
VPS11Q9H270 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS11Q9H270 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS11Q9H270 BNIP3P26-201ENST00000600827 554 ntBASIC5.17□□□□□ -1.58
VPS11Q9H270 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.17□□□□□ -1.58
VPS11Q9H270 AC008536.2-201ENST00000607284 349 ntBASIC5.17□□□□□ -1.58
VPS11Q9H270 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS11Q9H270 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS11Q9H270 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS11Q9H270 MIR6864-201ENST00000617935 70 ntBASIC5.17□□□□□ -1.58
VPS11Q9H270 AC118658.2-201ENST00000618697 459 ntBASIC5.17□□□□□ -1.58
VPS11Q9H270 AC009033.1-201ENST00000624279 431 ntBASIC5.17□□□□□ -1.58
VPS11Q9H270 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS11Q9H270 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS11Q9H270 AC107081.3-201ENST00000612715 2034 ntBASIC5.17□□□□□ -1.58
VPS11Q9H270 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VPS11Q9H270 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS11Q9H270 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS11Q9H270 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS11Q9H270 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.17□□□□□ -1.58
VPS11Q9H270 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
VPS11Q9H270 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.17□□□□□ -1.58
VPS11Q9H270 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS11Q9H270 AC104118.1-201ENST00000607625 1589 ntBASIC5.16□□□□□ -1.58
VPS11Q9H270 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS11Q9H270 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
VPS11Q9H270 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
VPS11Q9H270 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
VPS11Q9H270 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS11Q9H270 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS11Q9H270 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS11Q9H270 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS11Q9H270 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS11Q9H270 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS11Q9H270 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
VPS11Q9H270 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS11Q9H270 RNU6-1066P-201ENST00000363573 105 ntBASIC5.16□□□□□ -1.58
VPS11Q9H270 Y_RNA.394-201ENST00000383942 103 ntBASIC5.16□□□□□ -1.58
VPS11Q9H270 RNU6-444P-201ENST00000383988 108 ntBASIC5.16□□□□□ -1.58
VPS11Q9H270 RNA5SP284-201ENST00000384547 118 ntBASIC5.16□□□□□ -1.58
VPS11Q9H270 AL161909.1-201ENST00000397390 712 ntBASIC5.16□□□□□ -1.58
VPS11Q9H270 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
VPS11Q9H270 NRBF2P2-201ENST00000413087 861 ntBASIC5.16□□□□□ -1.58
VPS11Q9H270 RPL21P111-201ENST00000418453 477 ntBASIC5.16□□□□□ -1.58
VPS11Q9H270 AC008280.1-201ENST00000418851 412 ntBASIC5.16□□□□□ -1.58
VPS11Q9H270 GTF2IP23-201ENST00000423746 351 ntBASIC5.16□□□□□ -1.58
VPS11Q9H270 AL139148.1-201ENST00000427122 680 ntBASIC5.16□□□□□ -1.58
VPS11Q9H270 AC007559.1-201ENST00000428736 355 ntBASIC5.16□□□□□ -1.58
VPS11Q9H270 AL513175.1-201ENST00000431492 780 ntBASIC5.16□□□□□ -1.58
VPS11Q9H270 AC010881.1-201ENST00000433830 235 ntBASIC5.16□□□□□ -1.58
VPS11Q9H270 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.16□□□□□ -1.58
VPS11Q9H270 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS11Q9H270 AC105402.2-201ENST00000438503 358 ntBASIC5.16□□□□□ -1.58
VPS11Q9H270 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS11Q9H270 FAR2P1-206ENST00000449736 709 ntBASIC5.16□□□□□ -1.58
VPS11Q9H270 HMGN3P1-201ENST00000453847 193 ntBASIC5.16□□□□□ -1.58
VPS11Q9H270 RPL7P42-201ENST00000481005 679 ntBASIC5.16□□□□□ -1.58
VPS11Q9H270 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS11Q9H270 AC091133.4-201ENST00000511142 308 ntBASIC5.16□□□□□ -1.58
VPS11Q9H270 PTGES3P3-201ENST00000511479 482 ntBASIC5.16□□□□□ -1.58
VPS11Q9H270 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS11Q9H270 AC010342.1-201ENST00000514047 877 ntBASIC5.16□□□□□ -1.58
VPS11Q9H270 AC087808.1-201ENST00000520501 361 ntBASIC5.16□□□□□ -1.58
VPS11Q9H270 AC022690.1-201ENST00000526681 550 ntBASIC5.16□□□□□ -1.58
VPS11Q9H270 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS11Q9H270 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS11Q9H270 CR383656.6-201ENST00000550518 394 ntBASIC5.16□□□□□ -1.58
VPS11Q9H270 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS11Q9H270 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS11Q9H270 AC004825.1-201ENST00000555068 586 ntBASIC5.16□□□□□ -1.58
VPS11Q9H270 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS11Q9H270 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS11Q9H270 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS11Q9H270 AC011477.5-201ENST00000586571 259 ntBASIC5.16□□□□□ -1.58
VPS11Q9H270 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS11Q9H270 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS11Q9H270 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS11Q9H270 AP001429.1-201ENST00000602568 530 ntBASIC5.16□□□□□ -1.58
VPS11Q9H270 AC005191.1-201ENST00000603950 358 ntBASIC5.16□□□□□ -1.58
VPS11Q9H270 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms