Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AC108032.1-201ENST00000416706 207 ntBASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 AL161631.1-201ENST00000417933 486 ntBASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 OR2X1P-201ENST00000421144 687 ntBASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 MTND2P11-201ENST00000423638 648 ntBASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 RSL24D1P6-201ENST00000426934 401 ntBASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 SNORA71B-202ENST00000439232 272 ntBASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 AC104306.1-201ENST00000449702 371 ntBASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 RNA5SP246-201ENST00000458909 119 ntBASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 RPL7P47-201ENST00000497299 556 ntBASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 UBE2CP3-201ENST00000502715 450 ntBASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 AC011352.3-201ENST00000505162 593 ntBASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 HMGB1P22-201ENST00000505315 124 ntBASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 AC006116.5-201ENST00000591936 559 ntBASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 AL161729.3-201ENST00000603533 673 ntBASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 AC009318.4-201ENST00000620496 486 ntBASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.48□□□□□ -1.53
CHMP4AQ9BY43 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 RNU5B-4P-201ENST00000363508 111 ntBASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 RN7SKP227-201ENST00000364445 330 ntBASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 SNORD96B-201ENST00000386148 79 ntBASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 RNU4-65P-201ENST00000410473 140 ntBASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 AL160275.2-201ENST00000412010 394 ntBASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 AC099677.1-201ENST00000420575 175 ntBASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 MTCO1P48-201ENST00000448024 1096 ntBASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 RPS20P24-201ENST00000457473 361 ntBASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 RPL7P22-201ENST00000466005 733 ntBASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 RPS27AP13-201ENST00000498403 237 ntBASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 PRELID3BP5-201ENST00000508612 460 ntBASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 RN7SKP244-201ENST00000516513 307 ntBASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 MIR2116-201ENST00000517221 80 ntBASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 MRPL49P2-201ENST00000521066 465 ntBASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 AC244517.1-201ENST00000606030 2086 ntBASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CHMP4AQ9BY43 LARP1BP1-201ENST00000506036 1359 ntBASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 MTND4P34-201ENST00000572715 1371 ntBASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 AC019070.1-201ENST00000415008 1024 ntBASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 NANOGP6-201ENST00000429190 847 ntBASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 AC005345.1-201ENST00000431868 217 ntBASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 AC092393.1-201ENST00000439625 742 ntBASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 AC068587.1-201ENST00000483613 781 ntBASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 RPL23AP55-201ENST00000498163 452 ntBASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 AC146944.2-203ENST00000502493 354 ntBASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 MTCYBP37-201ENST00000510642 1133 ntBASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 AC139495.1-202ENST00000513164 354 ntBASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 AL121603.1-201ENST00000553815 142 ntBASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 MIR4644-201ENST00000579929 84 ntBASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 AL451086.1-201ENST00000605596 223 ntBASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 AP002802.2-201ENST00000605877 235 ntBASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 AC007546.1-201ENST00000619452 559 ntBASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 MIR7702-201ENST00000621931 59 ntBASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 AP003476.1-201ENST00000623984 516 ntBASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 AL031985.3-201ENST00000565390 2449 ntBASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CHMP4AQ9BY43 AC027287.1-201ENST00000553115 1453 ntBASIC5.45□□□□□ -1.54
CHMP4AQ9BY43 AL136164.4-201ENST00000625013 2135 ntBASIC5.45□□□□□ -1.54
CHMP4AQ9BY43 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms