Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 AL035407.2-201ENST00000454090 378 ntBASIC5.14□□□□□ -1.59
SALL3Q9BXA9 RAD23BP3-201ENST00000454157 1152 ntBASIC5.14□□□□□ -1.59
SALL3Q9BXA9 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 RNU7-140P-201ENST00000459546 60 ntBASIC5.14□□□□□ -1.59
SALL3Q9BXA9 RN7SL303P-201ENST00000469773 251 ntBASIC5.14□□□□□ -1.59
SALL3Q9BXA9 AC109327.1-201ENST00000471666 403 ntBASIC5.14□□□□□ -1.59
SALL3Q9BXA9 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 RPS6P4-201ENST00000494693 758 ntBASIC5.14□□□□□ -1.59
SALL3Q9BXA9 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 AC099522.1-202ENST00000514718 367 ntBASIC5.14□□□□□ -1.59
SALL3Q9BXA9 AC134698.5-201ENST00000519444 336 ntBASIC5.14□□□□□ -1.59
SALL3Q9BXA9 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 AP000873.5-201ENST00000533906 236 ntBASIC5.14□□□□□ -1.59
SALL3Q9BXA9 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 SULT1C2P2-201ENST00000562517 294 ntBASIC5.14□□□□□ -1.59
SALL3Q9BXA9 CYP2C60P-201ENST00000566088 139 ntBASIC5.14□□□□□ -1.59
SALL3Q9BXA9 AC079171.1-201ENST00000568788 914 ntBASIC5.14□□□□□ -1.59
SALL3Q9BXA9 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 AL357078.3-201ENST00000607528 618 ntBASIC5.14□□□□□ -1.59
SALL3Q9BXA9 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 AL592148.2-201ENST00000612210 372 ntBASIC5.14□□□□□ -1.59
SALL3Q9BXA9 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 AC099842.1-201ENST00000619919 596 ntBASIC5.14□□□□□ -1.59
SALL3Q9BXA9 AC024023.1-201ENST00000624530 922 ntBASIC5.14□□□□□ -1.59
SALL3Q9BXA9 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SALL3Q9BXA9 AL133243.3-201ENST00000617415 3004 ntBASIC5.13□□□□□ -1.59
SALL3Q9BXA9 AP000776.1-201ENST00000530032 1663 ntBASIC5.13□□□□□ -1.59
SALL3Q9BXA9 AC091046.3-201ENST00000631455 1574 ntBASIC5.13□□□□□ -1.59
SALL3Q9BXA9 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 RNU4-31P-201ENST00000384211 141 ntBASIC5.13□□□□□ -1.59
SALL3Q9BXA9 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 NPM1P11-201ENST00000417106 855 ntBASIC5.13□□□□□ -1.59
SALL3Q9BXA9 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 RPL17P36-201ENST00000420302 549 ntBASIC5.13□□□□□ -1.59
SALL3Q9BXA9 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 DNAJC19P7-201ENST00000428811 344 ntBASIC5.13□□□□□ -1.59
SALL3Q9BXA9 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 AC092170.1-201ENST00000440211 356 ntBASIC5.13□□□□□ -1.59
SALL3Q9BXA9 AL357520.1-201ENST00000441557 453 ntBASIC5.13□□□□□ -1.59
SALL3Q9BXA9 MTCO1P19-201ENST00000443487 500 ntBASIC5.13□□□□□ -1.59
SALL3Q9BXA9 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 NPM1P39-201ENST00000449818 867 ntBASIC5.13□□□□□ -1.59
SALL3Q9BXA9 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 CCDC75P1-201ENST00000469247 791 ntBASIC5.13□□□□□ -1.59
SALL3Q9BXA9 AC006517.1-201ENST00000480485 328 ntBASIC5.13□□□□□ -1.59
SALL3Q9BXA9 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 IGBP1P5-201ENST00000507524 1000 ntBASIC5.13□□□□□ -1.59
SALL3Q9BXA9 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.13□□□□□ -1.59
SALL3Q9BXA9 PRELID3BP4-201ENST00000515476 571 ntBASIC5.13□□□□□ -1.59
SALL3Q9BXA9 MTND4LP26-201ENST00000518144 282 ntBASIC5.13□□□□□ -1.59
SALL3Q9BXA9 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.13□□□□□ -1.59
SALL3Q9BXA9 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 BNIP3P26-201ENST00000600827 554 ntBASIC5.13□□□□□ -1.59
SALL3Q9BXA9 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
SALL3Q9BXA9 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 AC087359.1-201ENST00000508335 1740 ntBASIC5.12□□□□□ -1.59
SALL3Q9BXA9 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SALL3Q9BXA9 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms