Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 RNU6-317P-201ENST00000384031 107 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 MIR199A2-201ENST00000385289 110 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 ELOCP19-201ENST00000411919 318 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AC092638.1-201ENST00000411966 1275 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 TPT1P2-201ENST00000413105 503 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 MTATP6P20-201ENST00000414147 562 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AC119751.6-201ENST00000416712 186 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AC048351.1-201ENST00000420064 602 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AC092832.1-201ENST00000422934 400 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 USP9YP31-201ENST00000431405 881 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 PTGES3P1-201ENST00000439531 483 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 CBX1P1-201ENST00000440184 427 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 RPS11P1-201ENST00000451072 473 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 RPL12P26-201ENST00000452430 487 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 CDC42P1-201ENST00000456658 548 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AP000873.1-201ENST00000463987 400 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AC087312.1-201ENST00000471411 480 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AC074386.1-201ENST00000476560 767 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AL132838.2-201ENST00000492041 314 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AP001086.1-201ENST00000494882 321 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 RPS27AP13-201ENST00000498403 237 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 NDUFA5P12-201ENST00000503796 343 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AC118282.1-201ENST00000506408 765 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AC025674.1-201ENST00000507074 324 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 PRELID3BP4-201ENST00000515476 571 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 NDUFS5P6-201ENST00000529136 295 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 OR4A12P-201ENST00000530847 918 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 LRRC6P1-201ENST00000532188 885 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 YPEL5P3-201ENST00000547227 352 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 MTND1P24-201ENST00000552175 861 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AC006254.3-201ENST00000603353 884 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AC013244.3-201ENST00000605614 388 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AC092653.1-201ENST00000608509 531 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AC013468.1-201ENST00000608680 598 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AC099778.2-201ENST00000610904 211 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AC123768.4-201ENST00000616244 701 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AC139769.3-201ENST00000618383 175 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 MIR7703-201ENST00000620784 77 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AC090506.2-201ENST00000624521 419 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AC010608.2-201ENST00000624830 470 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 ZNF826P-207ENST00000622273 1910 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 LARP1BP1-201ENST00000506036 1359 ntBASIC3.75□□□□□ -1.81
CCDC28BQ9BUN5 AL118496.1-201ENST00000440201 1812 ntBASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 AC006042.3-201ENST00000454684 1469 ntBASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 RNF6P1-201ENST00000444889 1784 ntBASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 ANKRD36P1-201ENST00000344424 659 ntBASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 RNA5SP443-201ENST00000363083 132 ntBASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 RNU6-1339P-201ENST00000363574 91 ntBASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 RNU11-4P-201ENST00000391149 133 ntBASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 AC092642.1-201ENST00000392417 425 ntBASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 RPS26P8-201ENST00000393490 348 ntBASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 AC246680.2-201ENST00000422106 389 ntBASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 RPL30P3-201ENST00000424262 333 ntBASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 OSTCP5-201ENST00000425293 453 ntBASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 AC006466.1-201ENST00000438721 289 ntBASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 OFD1P3Y-201ENST00000453312 783 ntBASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 AP002884.2-201ENST00000471647 395 ntBASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 AC005912.1-201ENST00000495392 255 ntBASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 AC023050.1-201ENST00000498198 304 ntBASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 AC008638.1-201ENST00000506035 866 ntBASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 AC108475.1-201ENST00000507880 950 ntBASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 AC008837.1-201ENST00000511513 412 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms