Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 RN7SKP283-201ENST00000517197 270 ntBASIC4.29□□□□□ -1.72
RAD9AQ99638 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.29□□□□□ -1.72
RAD9AQ99638 YPEL5P3-201ENST00000547227 352 ntBASIC4.29□□□□□ -1.72
RAD9AQ99638 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RAD9AQ99638 Z82195.1-201ENST00000604558 398 ntBASIC4.29□□□□□ -1.72
RAD9AQ99638 AL049634.3-201ENST00000604968 457 ntBASIC4.29□□□□□ -1.72
RAD9AQ99638 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RAD9AQ99638 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.29□□□□□ -1.72
RAD9AQ99638 AP005264.7-201ENST00000625003 745 ntBASIC4.29□□□□□ -1.72
RAD9AQ99638 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.29□□□□□ -1.72
RAD9AQ99638 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
RAD9AQ99638 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
RAD9AQ99638 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
RAD9AQ99638 AC119744.1-201ENST00000454746 1715 ntBASIC4.29□□□□□ -1.72
RAD9AQ99638 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RAD9AQ99638 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RAD9AQ99638 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RAD9AQ99638 RNA5SP52-201ENST00000362448 134 ntBASIC4.28□□□□□ -1.72
RAD9AQ99638 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.28□□□□□ -1.72
RAD9AQ99638 SNORA51.12-201ENST00000384448 134 ntBASIC4.28□□□□□ -1.72
RAD9AQ99638 RPL7P27-201ENST00000403775 720 ntBASIC4.28□□□□□ -1.72
RAD9AQ99638 RNU6-584P-201ENST00000410350 95 ntBASIC4.28□□□□□ -1.72
RAD9AQ99638 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.28□□□□□ -1.72
RAD9AQ99638 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.28□□□□□ -1.72
RAD9AQ99638 LIPT1P1-201ENST00000415870 1186 ntBASIC4.28□□□□□ -1.72
RAD9AQ99638 SFR1P2-201ENST00000421841 730 ntBASIC4.28□□□□□ -1.72
RAD9AQ99638 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.28□□□□□ -1.72
RAD9AQ99638 SKP1P3-201ENST00000429280 487 ntBASIC4.28□□□□□ -1.72
RAD9AQ99638 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.28□□□□□ -1.72
RAD9AQ99638 FTH1P6-201ENST00000430768 320 ntBASIC4.28□□□□□ -1.72
RAD9AQ99638 AL929288.2-201ENST00000446368 407 ntBASIC4.28□□□□□ -1.72
RAD9AQ99638 AL606517.1-201ENST00000446914 387 ntBASIC4.28□□□□□ -1.72
RAD9AQ99638 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.28□□□□□ -1.72
RAD9AQ99638 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.28□□□□□ -1.72
RAD9AQ99638 BX248409.1-201ENST00000455497 255 ntBASIC4.28□□□□□ -1.72
RAD9AQ99638 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.28□□□□□ -1.72
RAD9AQ99638 AP000926.1-201ENST00000479573 241 ntBASIC4.28□□□□□ -1.72
RAD9AQ99638 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.28□□□□□ -1.72
RAD9AQ99638 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.28□□□□□ -1.72
RAD9AQ99638 TRAV31-201ENST00000502780 342 ntBASIC4.28□□□□□ -1.72
RAD9AQ99638 AC096571.1-202ENST00000506634 735 ntBASIC4.28□□□□□ -1.72
RAD9AQ99638 AC074250.1-201ENST00000511117 192 ntBASIC4.28□□□□□ -1.72
RAD9AQ99638 AC119751.1-201ENST00000513357 765 ntBASIC4.28□□□□□ -1.72
RAD9AQ99638 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RAD9AQ99638 AC008694.2-201ENST00000517591 306 ntBASIC4.28□□□□□ -1.72
RAD9AQ99638 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.28□□□□□ -1.72
RAD9AQ99638 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.28□□□□□ -1.72
RAD9AQ99638 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.28□□□□□ -1.72
RAD9AQ99638 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.28□□□□□ -1.72
RAD9AQ99638 ZNF415P1-201ENST00000582279 1166 ntBASIC4.28□□□□□ -1.72
RAD9AQ99638 MIR4760-201ENST00000585040 80 ntBASIC4.28□□□□□ -1.72
RAD9AQ99638 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.28□□□□□ -1.72
RAD9AQ99638 PCNAP1-202ENST00000595299 752 ntBASIC4.28□□□□□ -1.72
RAD9AQ99638 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.28□□□□□ -1.72
RAD9AQ99638 AL451044.1-201ENST00000604867 238 ntBASIC4.28□□□□□ -1.72
RAD9AQ99638 MIR432-201ENST00000606207 94 ntBASIC4.28□□□□□ -1.72
RAD9AQ99638 U3.45-201ENST00000607547 219 ntBASIC4.28□□□□□ -1.72
RAD9AQ99638 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.28□□□□□ -1.72
RAD9AQ99638 AL050303.3-201ENST00000613704 284 ntBASIC4.28□□□□□ -1.72
RAD9AQ99638 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.28□□□□□ -1.72
RAD9AQ99638 U6.105-201ENST00000637379 88 ntBASIC4.28□□□□□ -1.72
RAD9AQ99638 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.28□□□□□ -1.72
RAD9AQ99638 AP002001.2-201ENST00000529025 1469 ntBASIC4.28□□□□□ -1.72
RAD9AQ99638 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
RAD9AQ99638 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RAD9AQ99638 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RAD9AQ99638 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
RAD9AQ99638 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
RAD9AQ99638 MTND5P1-201ENST00000445440 1375 ntBASIC4.27□□□□□ -1.73
RAD9AQ99638 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RAD9AQ99638 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.27□□□□□ -1.73
RAD9AQ99638 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.27□□□□□ -1.73
RAD9AQ99638 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.27□□□□□ -1.73
RAD9AQ99638 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RAD9AQ99638 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
RAD9AQ99638 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RAD9AQ99638 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.27□□□□□ -1.73
RAD9AQ99638 MCTS2P-201ENST00000394552 546 ntBASIC4.27□□□□□ -1.73
RAD9AQ99638 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
RAD9AQ99638 RPL23AP48-201ENST00000406913 488 ntBASIC4.27□□□□□ -1.73
RAD9AQ99638 RNU6-77P-201ENST00000410554 91 ntBASIC4.27□□□□□ -1.73
RAD9AQ99638 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.27□□□□□ -1.73
RAD9AQ99638 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.27□□□□□ -1.73
RAD9AQ99638 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.27□□□□□ -1.73
RAD9AQ99638 AL035423.1-201ENST00000420331 213 ntBASIC4.27□□□□□ -1.73
RAD9AQ99638 AL139247.1-201ENST00000422768 325 ntBASIC4.27□□□□□ -1.73
RAD9AQ99638 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.27□□□□□ -1.73
RAD9AQ99638 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.27□□□□□ -1.73
RAD9AQ99638 MTCO2P23-201ENST00000425216 680 ntBASIC4.27□□□□□ -1.73
RAD9AQ99638 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.27□□□□□ -1.73
RAD9AQ99638 RPL23AP89-201ENST00000439324 255 ntBASIC4.27□□□□□ -1.73
RAD9AQ99638 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RAD9AQ99638 AC005002.1-201ENST00000447458 540 ntBASIC4.27□□□□□ -1.73
RAD9AQ99638 RN7SL293P-201ENST00000481765 281 ntBASIC4.27□□□□□ -1.73
RAD9AQ99638 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.27□□□□□ -1.73
RAD9AQ99638 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.27□□□□□ -1.73
RAD9AQ99638 PPBPP1-201ENST00000510807 373 ntBASIC4.27□□□□□ -1.73
RAD9AQ99638 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.27□□□□□ -1.73
RAD9AQ99638 IGLV3-26-201ENST00000520756 302 ntBASIC4.27□□□□□ -1.73
RAD9AQ99638 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms