Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.64□□□□□ -1.83
C9orf72Q96LT7 AC026333.2-201ENST00000542164 106 ntBASIC3.64□□□□□ -1.83
C9orf72Q96LT7 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.64□□□□□ -1.83
C9orf72Q96LT7 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.64□□□□□ -1.83
C9orf72Q96LT7 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.64□□□□□ -1.83
C9orf72Q96LT7 AC024220.1-201ENST00000603675 484 ntBASIC3.64□□□□□ -1.83
C9orf72Q96LT7 RNU1-30P-201ENST00000606575 163 ntBASIC3.64□□□□□ -1.83
C9orf72Q96LT7 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.64□□□□□ -1.83
C9orf72Q96LT7 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
C9orf72Q96LT7 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
C9orf72Q96LT7 RIOK3P1-201ENST00000418778 1528 ntBASIC3.64□□□□□ -1.83
C9orf72Q96LT7 PWAR6-201ENST00000552334 4618 ntBASIC3.64□□□□□ -1.83
C9orf72Q96LT7 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
C9orf72Q96LT7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
C9orf72Q96LT7 USP8P1-201ENST00000494673 3183 ntBASIC3.63□□□□□ -1.83
C9orf72Q96LT7 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.63□□□□□ -1.83
C9orf72Q96LT7 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.63□□□□□ -1.83
C9orf72Q96LT7 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
C9orf72Q96LT7 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
C9orf72Q96LT7 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
C9orf72Q96LT7 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
C9orf72Q96LT7 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
C9orf72Q96LT7 RNA5SP119-201ENST00000362715 117 ntBASIC3.63□□□□□ -1.83
C9orf72Q96LT7 CCNB2P1-201ENST00000399411 1150 ntBASIC3.63□□□□□ -1.83
C9orf72Q96LT7 RNU6-55P-201ENST00000411092 107 ntBASIC3.63□□□□□ -1.83
C9orf72Q96LT7 RNU6-954P-201ENST00000411355 107 ntBASIC3.63□□□□□ -1.83
C9orf72Q96LT7 AC010385.1-201ENST00000412374 256 ntBASIC3.63□□□□□ -1.83
C9orf72Q96LT7 PRELID3BP11-201ENST00000414230 479 ntBASIC3.63□□□□□ -1.83
C9orf72Q96LT7 AC068533.1-201ENST00000418542 415 ntBASIC3.63□□□□□ -1.83
C9orf72Q96LT7 RPL31P45-201ENST00000419532 356 ntBASIC3.63□□□□□ -1.83
C9orf72Q96LT7 AC245054.1-201ENST00000420944 258 ntBASIC3.63□□□□□ -1.83
C9orf72Q96LT7 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.63□□□□□ -1.83
C9orf72Q96LT7 RPL6P5-201ENST00000445678 828 ntBASIC3.63□□□□□ -1.83
C9orf72Q96LT7 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.63□□□□□ -1.83
C9orf72Q96LT7 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.63□□□□□ -1.83
C9orf72Q96LT7 RPS3AP46-201ENST00000448352 682 ntBASIC3.63□□□□□ -1.83
C9orf72Q96LT7 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.63□□□□□ -1.83
C9orf72Q96LT7 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
C9orf72Q96LT7 RPL37P3-201ENST00000456825 293 ntBASIC3.63□□□□□ -1.83
C9orf72Q96LT7 HMGB3P30-201ENST00000457863 606 ntBASIC3.63□□□□□ -1.83
C9orf72Q96LT7 AC010401.1-201ENST00000463867 348 ntBASIC3.63□□□□□ -1.83
C9orf72Q96LT7 AP001086.1-201ENST00000494882 321 ntBASIC3.63□□□□□ -1.83
C9orf72Q96LT7 AC020893.1-201ENST00000502452 580 ntBASIC3.63□□□□□ -1.83
C9orf72Q96LT7 AC006499.5-201ENST00000505037 514 ntBASIC3.63□□□□□ -1.83
C9orf72Q96LT7 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.63□□□□□ -1.83
C9orf72Q96LT7 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.63□□□□□ -1.83
C9orf72Q96LT7 RNU2-27P-201ENST00000516185 142 ntBASIC3.63□□□□□ -1.83
C9orf72Q96LT7 RNU6-551P-201ENST00000516661 103 ntBASIC3.63□□□□□ -1.83
C9orf72Q96LT7 HMGB1P46-201ENST00000520062 610 ntBASIC3.63□□□□□ -1.83
C9orf72Q96LT7 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.63□□□□□ -1.83
C9orf72Q96LT7 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.63□□□□□ -1.83
C9orf72Q96LT7 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.63□□□□□ -1.83
C9orf72Q96LT7 DUXAP6-201ENST00000553858 601 ntBASIC3.63□□□□□ -1.83
C9orf72Q96LT7 GTF2IP22-201ENST00000554443 182 ntBASIC3.63□□□□□ -1.83
C9orf72Q96LT7 MIR5047-201ENST00000579212 100 ntBASIC3.63□□□□□ -1.83
C9orf72Q96LT7 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.63□□□□□ -1.83
C9orf72Q96LT7 AC009093.8-201ENST00000641769 292 ntBASIC3.63□□□□□ -1.83
C9orf72Q96LT7 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
C9orf72Q96LT7 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
C9orf72Q96LT7 MTND4P31-201ENST00000425607 1343 ntBASIC3.63□□□□□ -1.83
C9orf72Q96LT7 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
C9orf72Q96LT7 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
C9orf72Q96LT7 AL021368.2-201ENST00000606125 5352 ntBASIC3.62□□□□□ -1.83
C9orf72Q96LT7 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
C9orf72Q96LT7 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
C9orf72Q96LT7 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.62□□□□□ -1.83
C9orf72Q96LT7 RNA5SP391-201ENST00000363456 119 ntBASIC3.62□□□□□ -1.83
C9orf72Q96LT7 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.62□□□□□ -1.83
C9orf72Q96LT7 MIR7-3-201ENST00000384898 110 ntBASIC3.62□□□□□ -1.83
C9orf72Q96LT7 RNA5SP44-201ENST00000410446 133 ntBASIC3.62□□□□□ -1.83
C9orf72Q96LT7 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.62□□□□□ -1.83
C9orf72Q96LT7 YME1L1P1-201ENST00000429435 297 ntBASIC3.62□□□□□ -1.83
C9orf72Q96LT7 BX679664.1-201ENST00000434429 253 ntBASIC3.62□□□□□ -1.83
C9orf72Q96LT7 TPTE2P1-204ENST00000435256 593 ntBASIC3.62□□□□□ -1.83
C9orf72Q96LT7 PDSS1P2-201ENST00000449397 678 ntBASIC3.62□□□□□ -1.83
C9orf72Q96LT7 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
C9orf72Q96LT7 AC111193.1-201ENST00000504097 155 ntBASIC3.62□□□□□ -1.83
C9orf72Q96LT7 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.62□□□□□ -1.83
C9orf72Q96LT7 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
C9orf72Q96LT7 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.62□□□□□ -1.83
C9orf72Q96LT7 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.62□□□□□ -1.83
C9orf72Q96LT7 AC138649.5-201ENST00000637456 137 ntBASIC3.62□□□□□ -1.83
C9orf72Q96LT7 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
C9orf72Q96LT7 OTUD4P1-201ENST00000237841 3067 ntBASIC3.62□□□□□ -1.83
C9orf72Q96LT7 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.62□□□□□ -1.83
C9orf72Q96LT7 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
C9orf72Q96LT7 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
C9orf72Q96LT7 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.62□□□□□ -1.83
C9orf72Q96LT7 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
C9orf72Q96LT7 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
C9orf72Q96LT7 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.62□□□□□ -1.83
C9orf72Q96LT7 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
C9orf72Q96LT7 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.61□□□□□ -1.83
C9orf72Q96LT7 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
C9orf72Q96LT7 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.61□□□□□ -1.83
C9orf72Q96LT7 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
C9orf72Q96LT7 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
C9orf72Q96LT7 RANP4-201ENST00000413361 655 ntBASIC3.61□□□□□ -1.83
C9orf72Q96LT7 AL445528.1-201ENST00000426330 420 ntBASIC3.61□□□□□ -1.83
C9orf72Q96LT7 AC006946.1-201ENST00000429106 328 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms