Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 PFKM-232ENST00000629846 381 ntTSL 4 BASIC7.01□□□□□ -1.29
LRCH3Q96II8 LINC02495-203ENST00000636704 242 ntBASIC7.01□□□□□ -1.29
LRCH3Q96II8 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.01□□□□□ -1.29
LRCH3Q96II8 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
LRCH3Q96II8 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.01□□□□□ -1.29
LRCH3Q96II8 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.01□□□□□ -1.29
LRCH3Q96II8 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
LRCH3Q96II8 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.01□□□□□ -1.29
LRCH3Q96II8 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
LRCH3Q96II8 ERVFRD-3-201ENST00000578561 1617 ntBASIC7.01□□□□□ -1.29
LRCH3Q96II8 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
LRCH3Q96II8 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
LRCH3Q96II8 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7□□□□□ -1.29
LRCH3Q96II8 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
LRCH3Q96II8 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7□□□□□ -1.29
LRCH3Q96II8 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7□□□□□ -1.29
LRCH3Q96II8 AL355488.2-201ENST00000609909 2850 ntBASIC7□□□□□ -1.29
LRCH3Q96II8 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7□□□□□ -1.29
LRCH3Q96II8 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7□□□□□ -1.29
LRCH3Q96II8 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7□□□□□ -1.29
LRCH3Q96II8 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7□□□□□ -1.29
LRCH3Q96II8 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7□□□□□ -1.29
LRCH3Q96II8 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7□□□□□ -1.29
LRCH3Q96II8 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7□□□□□ -1.29
LRCH3Q96II8 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7□□□□□ -1.29
LRCH3Q96II8 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
LRCH3Q96II8 AC104581.5-201ENST00000624171 7141 ntBASIC7□□□□□ -1.29
LRCH3Q96II8 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC7□□□□□ -1.29
LRCH3Q96II8 RN7SKP103-201ENST00000363848 320 ntBASIC7□□□□□ -1.29
LRCH3Q96II8 SNORA70.3-201ENST00000365075 132 ntBASIC7□□□□□ -1.29
LRCH3Q96II8 RNU6-81P-201ENST00000365608 104 ntBASIC7□□□□□ -1.29
LRCH3Q96II8 RNU6-1127P-201ENST00000384580 107 ntBASIC7□□□□□ -1.29
LRCH3Q96II8 RNU2-33P-201ENST00000410344 192 ntBASIC7□□□□□ -1.29
LRCH3Q96II8 RPL21P38-201ENST00000418090 167 ntBASIC7□□□□□ -1.29
LRCH3Q96II8 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC7□□□□□ -1.29
LRCH3Q96II8 NOTCH2P1-201ENST00000443481 624 ntBASIC7□□□□□ -1.29
LRCH3Q96II8 RPL21P89-201ENST00000444021 467 ntBASIC7□□□□□ -1.29
LRCH3Q96II8 RPL23AP15-201ENST00000450202 459 ntBASIC7□□□□□ -1.29
LRCH3Q96II8 AL445665.1-202ENST00000452436 324 ntBASIC7□□□□□ -1.29
LRCH3Q96II8 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC7□□□□□ -1.29
LRCH3Q96II8 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC7□□□□□ -1.29
LRCH3Q96II8 AP000893.1-201ENST00000474462 794 ntBASIC7□□□□□ -1.29
LRCH3Q96II8 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC7□□□□□ -1.29
LRCH3Q96II8 AC105384.2-201ENST00000508433 640 ntBASIC7□□□□□ -1.29
LRCH3Q96II8 AC146944.3-201ENST00000509969 371 ntBASIC7□□□□□ -1.29
LRCH3Q96II8 MAL2-201ENST00000522112 573 ntTSL 4 BASIC7□□□□□ -1.29
LRCH3Q96II8 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC7□□□□□ -1.29
LRCH3Q96II8 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC7□□□□□ -1.29
LRCH3Q96II8 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC7□□□□□ -1.29
LRCH3Q96II8 AC090115.3-201ENST00000553218 849 ntBASIC7□□□□□ -1.29
LRCH3Q96II8 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
LRCH3Q96II8 AL161423.1-201ENST00000613700 262 ntBASIC7□□□□□ -1.29
LRCH3Q96II8 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7□□□□□ -1.29
LRCH3Q96II8 AL512652.1-201ENST00000619006 500 ntBASIC7□□□□□ -1.29
LRCH3Q96II8 CDRT1-208ENST00000630868 794 ntBASIC7□□□□□ -1.29
LRCH3Q96II8 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC7□□□□□ -1.29
LRCH3Q96II8 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC7□□□□□ -1.29
LRCH3Q96II8 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC7□□□□□ -1.29
LRCH3Q96II8 AL117339.4-201ENST00000608335 7063 ntBASIC7□□□□□ -1.29
LRCH3Q96II8 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7□□□□□ -1.29
LRCH3Q96II8 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
LRCH3Q96II8 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7□□□□□ -1.29
LRCH3Q96II8 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7□□□□□ -1.29
LRCH3Q96II8 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
LRCH3Q96II8 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7□□□□□ -1.29
LRCH3Q96II8 FER-202ENST00000438717 1531 ntTSL 2 BASIC7□□□□□ -1.29
LRCH3Q96II8 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7□□□□□ -1.29
LRCH3Q96II8 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
LRCH3Q96II8 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
LRCH3Q96II8 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC7□□□□□ -1.29
LRCH3Q96II8 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
LRCH3Q96II8 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC7□□□□□ -1.29
LRCH3Q96II8 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7□□□□□ -1.29
LRCH3Q96II8 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7□□□□□ -1.29
LRCH3Q96II8 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7□□□□□ -1.29
LRCH3Q96II8 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
LRCH3Q96II8 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.99□□□□□ -1.29
LRCH3Q96II8 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.99□□□□□ -1.29
LRCH3Q96II8 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LRCH3Q96II8 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
LRCH3Q96II8 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LRCH3Q96II8 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
LRCH3Q96II8 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.99□□□□□ -1.29
LRCH3Q96II8 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
LRCH3Q96II8 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LRCH3Q96II8 Y_RNA.170-201ENST00000363746 110 ntBASIC6.99□□□□□ -1.29
LRCH3Q96II8 AL445189.1-201ENST00000405722 338 ntBASIC6.99□□□□□ -1.29
LRCH3Q96II8 AC008280.1-201ENST00000418851 412 ntBASIC6.99□□□□□ -1.29
LRCH3Q96II8 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.99□□□□□ -1.29
LRCH3Q96II8 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.99□□□□□ -1.29
LRCH3Q96II8 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC6.99□□□□□ -1.29
LRCH3Q96II8 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC6.99□□□□□ -1.29
LRCH3Q96II8 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC6.99□□□□□ -1.29
LRCH3Q96II8 AC108734.1-201ENST00000439549 399 ntBASIC6.99□□□□□ -1.29
LRCH3Q96II8 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC6.99□□□□□ -1.29
LRCH3Q96II8 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC6.99□□□□□ -1.29
LRCH3Q96II8 RNU7-120P-201ENST00000459334 63 ntBASIC6.99□□□□□ -1.29
LRCH3Q96II8 AC116533.1-201ENST00000459748 321 ntBASIC6.99□□□□□ -1.29
LRCH3Q96II8 AC104806.1-201ENST00000508720 308 ntBASIC6.99□□□□□ -1.29
LRCH3Q96II8 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms