Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AC127526.1-201ENST00000417526 366 ntBASIC6.18□□□□□ -1.42
TRIM11Q96F44 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM11Q96F44 SNRPEP7-201ENST00000438350 220 ntBASIC6.18□□□□□ -1.42
TRIM11Q96F44 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM11Q96F44 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM11Q96F44 AC004129.2-201ENST00000457229 287 ntBASIC6.18□□□□□ -1.42
TRIM11Q96F44 RPS4XP10-201ENST00000465034 731 ntBASIC6.18□□□□□ -1.42
TRIM11Q96F44 AC104687.1-201ENST00000485829 412 ntBASIC6.18□□□□□ -1.42
TRIM11Q96F44 GLUD1P3-202ENST00000508551 200 ntBASIC6.18□□□□□ -1.42
TRIM11Q96F44 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM11Q96F44 AC098591.2-201ENST00000510152 315 ntBASIC6.18□□□□□ -1.42
TRIM11Q96F44 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM11Q96F44 TTC39CP1-201ENST00000512513 755 ntBASIC6.18□□□□□ -1.42
TRIM11Q96F44 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM11Q96F44 SCARNA18.1-201ENST00000516330 83 ntBASIC6.18□□□□□ -1.42
TRIM11Q96F44 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM11Q96F44 AC136777.2-201ENST00000522979 358 ntBASIC6.18□□□□□ -1.42
TRIM11Q96F44 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM11Q96F44 AP000676.2-201ENST00000529711 301 ntBASIC6.18□□□□□ -1.42
TRIM11Q96F44 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM11Q96F44 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM11Q96F44 AC073539.2-201ENST00000597113 165 ntBASIC6.18□□□□□ -1.42
TRIM11Q96F44 AC124916.2-201ENST00000604416 224 ntBASIC6.18□□□□□ -1.42
TRIM11Q96F44 AL157817.1-201ENST00000614264 790 ntBASIC6.18□□□□□ -1.42
TRIM11Q96F44 AL136228.1-201ENST00000622221 319 ntBASIC6.18□□□□□ -1.42
TRIM11Q96F44 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM11Q96F44 MIR193BHG-214ENST00000641765 509 ntBASIC6.18□□□□□ -1.42
TRIM11Q96F44 AC079776.5-201ENST00000641920 211 ntBASIC6.18□□□□□ -1.42
TRIM11Q96F44 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
TRIM11Q96F44 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
TRIM11Q96F44 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM11Q96F44 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM11Q96F44 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM11Q96F44 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM11Q96F44 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM11Q96F44 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM11Q96F44 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM11Q96F44 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM11Q96F44 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
TRIM11Q96F44 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM11Q96F44 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM11Q96F44 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM11Q96F44 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM11Q96F44 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM11Q96F44 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM11Q96F44 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM11Q96F44 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM11Q96F44 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM11Q96F44 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM11Q96F44 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM11Q96F44 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM11Q96F44 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
TRIM11Q96F44 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM11Q96F44 RNU6-777P-201ENST00000364265 104 ntBASIC6.17□□□□□ -1.42
TRIM11Q96F44 Y_RNA.339-201ENST00000365325 102 ntBASIC6.17□□□□□ -1.42
TRIM11Q96F44 RNU6-98P-201ENST00000384173 107 ntBASIC6.17□□□□□ -1.42
TRIM11Q96F44 RNA5SP91-201ENST00000390902 119 ntBASIC6.17□□□□□ -1.42
TRIM11Q96F44 AL583835.1-201ENST00000399570 407 ntBASIC6.17□□□□□ -1.42
TRIM11Q96F44 Y_RNA.615-201ENST00000410769 117 ntBASIC6.17□□□□□ -1.42
TRIM11Q96F44 AC073264.1-201ENST00000411508 416 ntBASIC6.17□□□□□ -1.42
TRIM11Q96F44 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM11Q96F44 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM11Q96F44 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM11Q96F44 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM11Q96F44 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM11Q96F44 EIF5AP4-201ENST00000441206 465 ntBASIC6.17□□□□□ -1.42
TRIM11Q96F44 TXNP1-201ENST00000441872 371 ntBASIC6.17□□□□□ -1.42
TRIM11Q96F44 TIMM8BP2-201ENST00000445940 251 ntBASIC6.17□□□□□ -1.42
TRIM11Q96F44 AL035666.1-201ENST00000446195 348 ntBASIC6.17□□□□□ -1.42
TRIM11Q96F44 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM11Q96F44 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.17□□□□□ -1.42
TRIM11Q96F44 AC111193.1-201ENST00000504097 155 ntBASIC6.17□□□□□ -1.42
TRIM11Q96F44 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM11Q96F44 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM11Q96F44 AC018797.1-201ENST00000510791 255 ntBASIC6.17□□□□□ -1.42
TRIM11Q96F44 AC006499.2-201ENST00000513470 337 ntBASIC6.17□□□□□ -1.42
TRIM11Q96F44 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM11Q96F44 AC105031.1-201ENST00000518550 476 ntBASIC6.17□□□□□ -1.42
TRIM11Q96F44 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.17□□□□□ -1.42
TRIM11Q96F44 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM11Q96F44 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM11Q96F44 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM11Q96F44 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM11Q96F44 AC091078.2-201ENST00000557145 559 ntBASIC6.17□□□□□ -1.42
TRIM11Q96F44 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM11Q96F44 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM11Q96F44 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM11Q96F44 MIR3154-201ENST00000577829 84 ntBASIC6.17□□□□□ -1.42
TRIM11Q96F44 MIR3167-201ENST00000579623 85 ntBASIC6.17□□□□□ -1.42
TRIM11Q96F44 MIR4502-201ENST00000580432 81 ntBASIC6.17□□□□□ -1.42
TRIM11Q96F44 MIR5010-201ENST00000582846 120 ntBASIC6.17□□□□□ -1.42
TRIM11Q96F44 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM11Q96F44 AC011468.4-201ENST00000603942 409 ntBASIC6.17□□□□□ -1.42
TRIM11Q96F44 AC245389.1-201ENST00000605141 529 ntBASIC6.17□□□□□ -1.42
TRIM11Q96F44 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM11Q96F44 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM11Q96F44 AP001052.1-201ENST00000626421 99 ntBASIC6.17□□□□□ -1.42
TRIM11Q96F44 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM11Q96F44 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM11Q96F44 PARP4P2-201ENST00000446672 3326 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms