Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
UBE2E3Q969T4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.51□□□□□ -1.85
UBE2E3Q969T4 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.51□□□□□ -1.85
UBE2E3Q969T4 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
UBE2E3Q969T4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
UBE2E3Q969T4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
UBE2E3Q969T4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.5□□□□□ -1.85
UBE2E3Q969T4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.5□□□□□ -1.85
UBE2E3Q969T4 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
UBE2E3Q969T4 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
UBE2E3Q969T4 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.5□□□□□ -1.85
UBE2E3Q969T4 RNU6-356P-201ENST00000384140 107 ntBASIC3.5□□□□□ -1.85
UBE2E3Q969T4 MIR525-201ENST00000384978 85 ntBASIC3.5□□□□□ -1.85
UBE2E3Q969T4 SNORA57.1-201ENST00000391227 145 ntBASIC3.5□□□□□ -1.85
UBE2E3Q969T4 RPL23AP48-201ENST00000406913 488 ntBASIC3.5□□□□□ -1.85
UBE2E3Q969T4 RNU6-272P-201ENST00000411028 104 ntBASIC3.5□□□□□ -1.85
UBE2E3Q969T4 RAC1P3-201ENST00000416129 580 ntBASIC3.5□□□□□ -1.85
UBE2E3Q969T4 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.5□□□□□ -1.85
UBE2E3Q969T4 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
UBE2E3Q969T4 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.5□□□□□ -1.85
UBE2E3Q969T4 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.5□□□□□ -1.85
UBE2E3Q969T4 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.5□□□□□ -1.85
UBE2E3Q969T4 RPL6P5-201ENST00000445678 828 ntBASIC3.5□□□□□ -1.85
UBE2E3Q969T4 MTND1P33-201ENST00000446251 917 ntBASIC3.5□□□□□ -1.85
UBE2E3Q969T4 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.5□□□□□ -1.85
UBE2E3Q969T4 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.5□□□□□ -1.85
UBE2E3Q969T4 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.5□□□□□ -1.85
UBE2E3Q969T4 AC093267.1-201ENST00000489176 961 ntBASIC3.5□□□□□ -1.85
UBE2E3Q969T4 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.5□□□□□ -1.85
UBE2E3Q969T4 AC026402.1-201ENST00000513642 170 ntBASIC3.5□□□□□ -1.85
UBE2E3Q969T4 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.5□□□□□ -1.85
UBE2E3Q969T4 RNU2-27P-201ENST00000516185 142 ntBASIC3.5□□□□□ -1.85
UBE2E3Q969T4 Vault.1-201ENST00000516474 102 ntBASIC3.5□□□□□ -1.85
UBE2E3Q969T4 RANP9-201ENST00000519957 271 ntBASIC3.5□□□□□ -1.85
UBE2E3Q969T4 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.5□□□□□ -1.85
UBE2E3Q969T4 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.5□□□□□ -1.85
UBE2E3Q969T4 OR8L1P-201ENST00000534005 955 ntBASIC3.5□□□□□ -1.85
UBE2E3Q969T4 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.5□□□□□ -1.85
UBE2E3Q969T4 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.5□□□□□ -1.85
UBE2E3Q969T4 AL049634.3-201ENST00000604968 457 ntBASIC3.5□□□□□ -1.85
UBE2E3Q969T4 RNA5SP108-201ENST00000605921 117 ntBASIC3.5□□□□□ -1.85
UBE2E3Q969T4 AC005972.3-201ENST00000606304 481 ntBASIC3.5□□□□□ -1.85
UBE2E3Q969T4 AC112503.2-201ENST00000609005 552 ntBASIC3.5□□□□□ -1.85
UBE2E3Q969T4 AP003355.3-201ENST00000623465 114 ntBASIC3.5□□□□□ -1.85
UBE2E3Q969T4 AL109659.3-201ENST00000624985 950 ntBASIC3.5□□□□□ -1.85
UBE2E3Q969T4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.5□□□□□ -1.85
UBE2E3Q969T4 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
UBE2E3Q969T4 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.5□□□□□ -1.85
UBE2E3Q969T4 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
UBE2E3Q969T4 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.5□□□□□ -1.85
UBE2E3Q969T4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
UBE2E3Q969T4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
UBE2E3Q969T4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.49□□□□□ -1.85
UBE2E3Q969T4 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
UBE2E3Q969T4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
UBE2E3Q969T4 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
UBE2E3Q969T4 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
UBE2E3Q969T4 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
UBE2E3Q969T4 SOD2P1-201ENST00000396543 562 ntBASIC3.49□□□□□ -1.85
UBE2E3Q969T4 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.49□□□□□ -1.85
UBE2E3Q969T4 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.49□□□□□ -1.85
UBE2E3Q969T4 AL606495.1-201ENST00000422100 813 ntBASIC3.49□□□□□ -1.85
UBE2E3Q969T4 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.49□□□□□ -1.85
UBE2E3Q969T4 OSTCP5-201ENST00000425293 453 ntBASIC3.49□□□□□ -1.85
UBE2E3Q969T4 MTATP6P11-201ENST00000428071 670 ntBASIC3.49□□□□□ -1.85
UBE2E3Q969T4 PSMA2P3-201ENST00000429685 675 ntBASIC3.49□□□□□ -1.85
UBE2E3Q969T4 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.49□□□□□ -1.85
UBE2E3Q969T4 AL365396.1-201ENST00000430854 671 ntBASIC3.49□□□□□ -1.85
UBE2E3Q969T4 AL513175.1-201ENST00000431492 780 ntBASIC3.49□□□□□ -1.85
UBE2E3Q969T4 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.49□□□□□ -1.85
UBE2E3Q969T4 RPS26P30-201ENST00000443431 335 ntBASIC3.49□□□□□ -1.85
UBE2E3Q969T4 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
UBE2E3Q969T4 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.49□□□□□ -1.85
UBE2E3Q969T4 AC146507.1-201ENST00000468335 354 ntBASIC3.49□□□□□ -1.85
UBE2E3Q969T4 AC023598.1-201ENST00000472521 361 ntBASIC3.49□□□□□ -1.85
UBE2E3Q969T4 AC007688.1-201ENST00000475592 759 ntBASIC3.49□□□□□ -1.85
UBE2E3Q969T4 AC091959.2-201ENST00000477363 321 ntBASIC3.49□□□□□ -1.85
UBE2E3Q969T4 AC015724.1-201ENST00000478577 156 ntBASIC3.49□□□□□ -1.85
UBE2E3Q969T4 UBE2CP3-201ENST00000502715 450 ntBASIC3.49□□□□□ -1.85
UBE2E3Q969T4 AC027338.1-201ENST00000514840 825 ntBASIC3.49□□□□□ -1.85
UBE2E3Q969T4 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.49□□□□□ -1.85
UBE2E3Q969T4 AP003168.1-201ENST00000530091 307 ntBASIC3.49□□□□□ -1.85
UBE2E3Q969T4 AP000916.1-201ENST00000533869 835 ntBASIC3.49□□□□□ -1.85
UBE2E3Q969T4 AP003717.3-201ENST00000544832 1180 ntBASIC3.49□□□□□ -1.85
UBE2E3Q969T4 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.49□□□□□ -1.85
UBE2E3Q969T4 AC008687.2-201ENST00000597865 520 ntBASIC3.49□□□□□ -1.85
UBE2E3Q969T4 AC006077.1-201ENST00000604746 343 ntBASIC3.49□□□□□ -1.85
UBE2E3Q969T4 AL391497.1-201ENST00000608671 547 ntBASIC3.49□□□□□ -1.85
UBE2E3Q969T4 VN1R9P-201ENST00000614184 867 ntBASIC3.49□□□□□ -1.85
UBE2E3Q969T4 AC121761.2-201ENST00000617300 689 ntBASIC3.49□□□□□ -1.85
UBE2E3Q969T4 AC069209.1-201ENST00000619282 651 ntBASIC3.49□□□□□ -1.85
UBE2E3Q969T4 AC068831.8-201ENST00000620171 435 ntBASIC3.49□□□□□ -1.85
UBE2E3Q969T4 AC067931.1-201ENST00000624190 671 ntBASIC3.49□□□□□ -1.85
UBE2E3Q969T4 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.49□□□□□ -1.85
UBE2E3Q969T4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
UBE2E3Q969T4 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.49□□□□□ -1.85
UBE2E3Q969T4 AC026951.1-201ENST00000559530 2459 ntBASIC3.49□□□□□ -1.85
UBE2E3Q969T4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
UBE2E3Q969T4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
UBE2E3Q969T4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms