Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.71□□□□□ -1.65
ATG4AQ8WYN0 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.71□□□□□ -1.65
ATG4AQ8WYN0 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.71□□□□□ -1.65
ATG4AQ8WYN0 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.71□□□□□ -1.65
ATG4AQ8WYN0 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 Y_RNA.3-201ENST00000362331 103 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 RNU4-44P-201ENST00000363050 141 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 MIR92A2-201ENST00000385299 75 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 RN7SKP267-201ENST00000410381 285 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 RNU4-34P-201ENST00000410431 124 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 RPS7P13-201ENST00000413955 498 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AC016769.2-201ENST00000414815 475 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AC073335.1-201ENST00000427776 363 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AC005154.2-201ENST00000438110 379 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 FHP1-201ENST00000442741 703 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 EPS15P1-201ENST00000448836 336 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AL354710.1-201ENST00000453641 246 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 SCARNA10-201ENST00000459255 330 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AP000942.1-201ENST00000463969 747 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AC104763.1-201ENST00000475274 360 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 RN7SL41P-201ENST00000476144 297 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AC108022.1-201ENST00000493466 478 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 CDC42P4-201ENST00000510507 563 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AC137768.1-201ENST00000549998 553 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 GTF2IP22-201ENST00000554443 182 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 PCMTD1P2-201ENST00000565017 355 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 EIF1P4-201ENST00000572664 335 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 MIR3667-201ENST00000581025 74 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 RN7SL52P-201ENST00000584271 284 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AC010201.1-201ENST00000605051 540 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AC087241.4-201ENST00000612441 480 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AC016769.4-201ENST00000616893 535 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 MIR6853-201ENST00000619642 74 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AC091905.2-201ENST00000623143 306 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 U3.53-201ENST00000628922 216 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 AC010928.1-201ENST00000592477 1447 ntBASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATG4AQ8WYN0 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 AC010329.2-201ENST00000595195 2737 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 ZNF37BP-203ENST00000452306 1352 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 AC016716.1-201ENST00000265882 708 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 AL590240.1-201ENST00000334118 313 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 RNU6-249P-201ENST00000363016 102 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 RNU6-433P-201ENST00000363216 104 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 AC007066.1-201ENST00000392902 381 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 RN7SKP100-201ENST00000411258 284 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 RPL21P108-201ENST00000413857 481 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 ELOCP17-201ENST00000414751 326 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 ATG4AP1-201ENST00000416893 538 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 AL953862.1-201ENST00000423016 168 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms