Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
SHROOM3Q8TF72 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
SHROOM3Q8TF72 RANP4-201ENST00000413361 655 ntBASIC3.34□□□□□ -1.88
SHROOM3Q8TF72 AL121890.1-201ENST00000435457 205 ntBASIC3.34□□□□□ -1.88
SHROOM3Q8TF72 RPL26P28-201ENST00000451325 435 ntBASIC3.34□□□□□ -1.88
SHROOM3Q8TF72 AC107934.2-201ENST00000518653 310 ntBASIC3.34□□□□□ -1.88
SHROOM3Q8TF72 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.34□□□□□ -1.88
SHROOM3Q8TF72 AC018442.3-201ENST00000523025 183 ntBASIC3.34□□□□□ -1.88
SHROOM3Q8TF72 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC3.34□□□□□ -1.88
SHROOM3Q8TF72 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.34□□□□□ -1.88
SHROOM3Q8TF72 RMST_8.1-201ENST00000610287 165 ntBASIC3.34□□□□□ -1.88
SHROOM3Q8TF72 AC007998.5-201ENST00000622938 237 ntBASIC3.34□□□□□ -1.88
SHROOM3Q8TF72 AC026422.1-201ENST00000623961 452 ntBASIC3.34□□□□□ -1.88
SHROOM3Q8TF72 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
SHROOM3Q8TF72 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SHROOM3Q8TF72 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.88
SHROOM3Q8TF72 THAP12P8-201ENST00000447914 2115 ntBASIC3.34□□□□□ -1.88
SHROOM3Q8TF72 AC093010.3-201ENST00000570269 15214 ntBASIC3.33□□□□□ -1.88
SHROOM3Q8TF72 AC004972.1-201ENST00000623934 2209 ntBASIC3.33□□□□□ -1.88
SHROOM3Q8TF72 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
SHROOM3Q8TF72 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.33□□□□□ -1.88
SHROOM3Q8TF72 RPL30P2-201ENST00000414021 291 ntBASIC3.33□□□□□ -1.88
SHROOM3Q8TF72 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.33□□□□□ -1.88
SHROOM3Q8TF72 AC002553.2-201ENST00000453217 340 ntBASIC3.33□□□□□ -1.88
SHROOM3Q8TF72 MTCO3P42-201ENST00000509488 518 ntBASIC3.33□□□□□ -1.88
SHROOM3Q8TF72 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.33□□□□□ -1.88
SHROOM3Q8TF72 MTCO3P39-201ENST00000514812 518 ntBASIC3.33□□□□□ -1.88
SHROOM3Q8TF72 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SHROOM3Q8TF72 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.33□□□□□ -1.88
SHROOM3Q8TF72 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.33□□□□□ -1.88
SHROOM3Q8TF72 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.33□□□□□ -1.88
SHROOM3Q8TF72 MIR7106-201ENST00000612419 65 ntBASIC3.33□□□□□ -1.88
SHROOM3Q8TF72 U7.8-201ENST00000619968 63 ntBASIC3.33□□□□□ -1.88
SHROOM3Q8TF72 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.33□□□□□ -1.88
SHROOM3Q8TF72 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHROOM3Q8TF72 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SHROOM3Q8TF72 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHROOM3Q8TF72 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHROOM3Q8TF72 AP000936.3-201ENST00000438127 255 ntBASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 Z99127.3-201ENST00000448158 395 ntBASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 RN7SL504P-201ENST00000494496 287 ntBASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 AP001207.2-201ENST00000519490 539 ntBASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 OR4R3P-201ENST00000525084 838 ntBASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 AC018552.3-201ENST00000567416 561 ntBASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 MIR3945-201ENST00000581853 98 ntBASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 AC104763.2-201ENST00000604179 382 ntBASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 uc_338.32-201ENST00000615087 172 ntBASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 ATP5A1P2-202ENST00000616464 443 ntBASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 AL590240.3-201ENST00000621416 943 ntBASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 AC024341.1-201ENST00000526444 1552 ntBASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 SNORA80A-201ENST00000363922 136 ntBASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 RPL35AP12-201ENST00000425362 338 ntBASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 BX890604.2-201ENST00000427883 474 ntBASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 RPL32P28-201ENST00000443577 397 ntBASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 RPL37P4-201ENST00000448908 268 ntBASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 AC021205.2-201ENST00000480069 347 ntBASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 AC021678.1-201ENST00000505195 936 ntBASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 AC084036.1-201ENST00000609190 508 ntBASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 AC096586.2-201ENST00000610260 441 ntBASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHROOM3Q8TF72 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 AC011503.2-201ENST00000594230 1500 ntBASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 U3.11-201ENST00000364476 212 ntBASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 OR1AA1P-201ENST00000419597 916 ntBASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 OOSP1P1-201ENST00000423265 274 ntBASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 RPL23AP69-201ENST00000431134 458 ntBASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 RPL23AP22-201ENST00000437556 453 ntBASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 CST9LP2-201ENST00000437612 320 ntBASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 RPL7P59-201ENST00000447700 943 ntBASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 AL136097.1-201ENST00000456945 913 ntBASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 RN7SL863P-201ENST00000462370 296 ntBASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 AC106872.2-201ENST00000494303 480 ntBASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 SNORA64.4-201ENST00000516632 81 ntBASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 AC078899.5-201ENST00000612475 178 ntBASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
SHROOM3Q8TF72 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms