Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
TRAF3IP1Q8TDR0 BDP1P-201ENST00000582658 1990 ntBASIC4.12□□□□□ -1.75
TRAF3IP1Q8TDR0 AL122126.1-201ENST00000546905 1318 ntBASIC4.12□□□□□ -1.75
TRAF3IP1Q8TDR0 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRAF3IP1Q8TDR0 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 RNU6-575P-201ENST00000411326 105 ntBASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 RPL31P2-201ENST00000413849 377 ntBASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 PPIAP3-201ENST00000450588 505 ntBASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 AC087879.1-201ENST00000474343 374 ntBASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 MTND3P3-201ENST00000505004 126 ntBASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 RN7SL600P-201ENST00000581811 299 ntBASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 RNU4-89P-201ENST00000607443 133 ntBASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 AC090506.2-201ENST00000624521 419 ntBASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 MTND5P31-201ENST00000419366 1374 ntBASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 AP002001.2-201ENST00000529025 1469 ntBASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
TRAF3IP1Q8TDR0 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 FAM3C2-201ENST00000312214 681 ntBASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 RNA5SP399-201ENST00000364003 117 ntBASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 RPS26P8-201ENST00000393490 348 ntBASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 MCTS2P-201ENST00000394552 546 ntBASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 USP9YP21-201ENST00000420603 432 ntBASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 AC009237.2-201ENST00000421358 284 ntBASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 AL691449.1-201ENST00000426570 421 ntBASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 RPL36P19-201ENST00000430744 301 ntBASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 B3GNT2P1-201ENST00000434960 952 ntBASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 RANP8-201ENST00000444720 713 ntBASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 RPL29P29-201ENST00000448725 423 ntBASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 Z99714.1-201ENST00000450463 807 ntBASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 RPS11P1-201ENST00000451072 473 ntBASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 AC244505.3-201ENST00000454598 187 ntBASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 GAPDHP39-201ENST00000481866 979 ntBASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 AC110792.1-201ENST00000491826 472 ntBASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 NIPA2P2-201ENST00000496376 1083 ntBASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 AC104417.1-201ENST00000523974 751 ntBASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 OR8L1P-201ENST00000534005 955 ntBASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 AC092851.1-201ENST00000535964 478 ntBASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 MIR4700-201ENST00000578311 74 ntBASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 AC069366.1-201ENST00000583159 838 ntBASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 AC020914.4-201ENST00000597690 277 ntBASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 BNIP3P27-201ENST00000599991 412 ntBASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 AL136370.1-201ENST00000608166 691 ntBASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 AC093673.2-201ENST00000609674 331 ntBASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 ELL2P4-201ENST00000446870 1376 ntBASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 AC111188.2-201ENST00000529697 1387 ntBASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 UBE3AP2-201ENST00000429033 2259 ntBASIC4.1□□□□□ -1.75
TRAF3IP1Q8TDR0 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms