Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 RNU6-77P-201ENST00000410554 91 ntBASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 AC013404.1-201ENST00000413068 249 ntBASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 AL953862.1-201ENST00000423016 168 ntBASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 AL590399.2-201ENST00000427536 309 ntBASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 ARL5AP4-201ENST00000430731 512 ntBASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 AC023512.1-201ENST00000444513 499 ntBASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 AC099563.1-201ENST00000456086 418 ntBASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 RPS26P24-201ENST00000497656 331 ntBASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 HMGB1P28-201ENST00000507778 552 ntBASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 TTC39CP1-201ENST00000512513 755 ntBASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 RNU6-1334P-201ENST00000516032 105 ntBASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 SUB1P1-201ENST00000524415 382 ntBASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 AP003181.2-201ENST00000528941 181 ntBASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 AC109635.4-202ENST00000531666 412 ntBASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 AC122688.1-201ENST00000541494 223 ntBASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 AC126177.5-201ENST00000549599 178 ntBASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 AC053481.3-201ENST00000577881 843 ntBASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 SUMO2P15-201ENST00000604285 278 ntBASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 AC097468.3-201ENST00000607956 456 ntBASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 AL161734.1-201ENST00000609720 557 ntBASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 AL138960.1-201ENST00000613838 513 ntBASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 MKKS-204ENST00000639674 192 ntBASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 AC235565.1-201ENST00000456962 1325 ntBASIC6.48□□□□□ -1.37
NEDD1Q8NHV4 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 AC116158.1-201ENST00000560231 2129 ntBASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 U3.10-201ENST00000364459 214 ntBASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 Y_RNA.339-201ENST00000365325 102 ntBASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 MIR1178-201ENST00000408396 91 ntBASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 DPY19L1P2-201ENST00000426647 915 ntBASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 PRPF38AP2-201ENST00000438179 851 ntBASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 CBX1P1-201ENST00000440184 427 ntBASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 RPL17P49-201ENST00000443728 411 ntBASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 AC105399.1-202ENST00000447303 205 ntBASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 AZGP1P2-201ENST00000454506 345 ntBASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 EIF4EP3-201ENST00000498782 656 ntBASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 AC112204.1-201ENST00000502591 103 ntBASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 MTND5P4-201ENST00000514978 288 ntBASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 RNU6-1143P-201ENST00000516125 104 ntBASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 RN7SKP99-201ENST00000517028 307 ntBASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 AC009902.1-201ENST00000519351 183 ntBASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 RGS4-209ENST00000531057 544 ntTSL 4 BASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 CYCSP2-201ENST00000558168 301 ntBASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 AC079075.1-201ENST00000559543 878 ntBASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 AC124068.1-201ENST00000563131 678 ntBASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 AC009117.1-201ENST00000563948 554 ntBASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 AC138915.2-201ENST00000569776 97 ntBASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 MIR544B-201ENST00000582372 78 ntBASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 AC008966.2-201ENST00000606157 453 ntBASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 AC107871.2-201ENST00000612894 502 ntBASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 MIR6837-201ENST00000620884 64 ntBASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 AC067931.1-201ENST00000624190 671 ntBASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
NEDD1Q8NHV4 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms