Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC112Q8NEF3 NDUFB4P5-201ENST00000415445 361 ntBASIC3.73□□□□□ -1.81
CCDC112Q8NEF3 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC112Q8NEF3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC112Q8NEF3 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC112Q8NEF3 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC112Q8NEF3 MTCYBP31-201ENST00000438855 1122 ntBASIC3.73□□□□□ -1.81
CCDC112Q8NEF3 AC146507.2-201ENST00000460608 476 ntBASIC3.73□□□□□ -1.81
CCDC112Q8NEF3 AP000873.1-201ENST00000463987 400 ntBASIC3.73□□□□□ -1.81
CCDC112Q8NEF3 RPL7P49-201ENST00000471402 708 ntBASIC3.73□□□□□ -1.81
CCDC112Q8NEF3 AC093278.1-201ENST00000494700 600 ntBASIC3.73□□□□□ -1.81
CCDC112Q8NEF3 AC093853.1-201ENST00000515689 483 ntBASIC3.73□□□□□ -1.81
CCDC112Q8NEF3 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC112Q8NEF3 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.73□□□□□ -1.81
CCDC112Q8NEF3 AC012314.7-201ENST00000619693 93 ntBASIC3.73□□□□□ -1.81
CCDC112Q8NEF3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC112Q8NEF3 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC112Q8NEF3 ZNF285B-201ENST00000561698 1767 ntBASIC3.73□□□□□ -1.81
CCDC112Q8NEF3 AC138393.1-206ENST00000540997 1886 ntBASIC3.73□□□□□ -1.81
CCDC112Q8NEF3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 RNA5SP124-201ENST00000362739 110 ntBASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 SNORA70.4-201ENST00000365509 134 ntBASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 SNORA5A-201ENST00000384111 134 ntBASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 SNORA70E-201ENST00000384492 135 ntBASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 Z99755.1-201ENST00000414048 380 ntBASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 SDCBPP3-201ENST00000419629 891 ntBASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 RPL6P5-201ENST00000445678 828 ntBASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 AP001086.1-201ENST00000494882 321 ntBASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 AC006499.5-201ENST00000505037 514 ntBASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 RNU1-143P-201ENST00000516296 146 ntBASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 RNU1-95P-201ENST00000516357 160 ntBASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 RNU1-128P-201ENST00000516704 160 ntBASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 OR8I1P-201ENST00000529291 931 ntBASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 U1.23-201ENST00000610293 146 ntBASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 RNU1-68P-201ENST00000615382 146 ntBASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 MIR8058-201ENST00000615737 89 ntBASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 AL589935.2-201ENST00000616471 1231 ntBASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 U1.39-201ENST00000621562 146 ntBASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 AP003072.4-201ENST00000624580 310 ntBASIC3.72□□□□□ -1.81
CCDC112Q8NEF3 AC107081.3-201ENST00000612715 2034 ntBASIC3.71□□□□□ -1.81
CCDC112Q8NEF3 SEPT7P7-201ENST00000420492 1301 ntBASIC3.71□□□□□ -1.81
CCDC112Q8NEF3 AC008264.2-201ENST00000610193 3731 ntBASIC3.71□□□□□ -1.81
CCDC112Q8NEF3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC112Q8NEF3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC112Q8NEF3 RNA5SP119-201ENST00000362715 117 ntBASIC3.71□□□□□ -1.82
CCDC112Q8NEF3 RPL21P17-201ENST00000397467 475 ntBASIC3.71□□□□□ -1.82
CCDC112Q8NEF3 GSTA12P-201ENST00000402398 508 ntBASIC3.71□□□□□ -1.82
CCDC112Q8NEF3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.71□□□□□ -1.82
CCDC112Q8NEF3 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC112Q8NEF3 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC112Q8NEF3 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC112Q8NEF3 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC112Q8NEF3 AL157884.3-201ENST00000448273 1184 ntBASIC3.71□□□□□ -1.82
CCDC112Q8NEF3 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC112Q8NEF3 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC112Q8NEF3 RNA5SP217-201ENST00000515959 91 ntBASIC3.71□□□□□ -1.82
CCDC112Q8NEF3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.71□□□□□ -1.82
CCDC112Q8NEF3 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.71□□□□□ -1.82
CCDC112Q8NEF3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CCDC112Q8NEF3 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC112Q8NEF3 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC112Q8NEF3 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC112Q8NEF3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC112Q8NEF3 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC112Q8NEF3 AC009093.8-201ENST00000641769 292 ntBASIC3.71□□□□□ -1.82
CCDC112Q8NEF3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC112Q8NEF3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC112Q8NEF3 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC112Q8NEF3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC112Q8NEF3 AL356274.2-201ENST00000624379 3752 ntBASIC3.71□□□□□ -1.82
CCDC112Q8NEF3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
CCDC112Q8NEF3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC112Q8NEF3 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CCDC112Q8NEF3 U3.6-201ENST00000363622 211 ntBASIC3.7□□□□□ -1.82
CCDC112Q8NEF3 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC112Q8NEF3 AC007390.1-201ENST00000415722 356 ntBASIC3.7□□□□□ -1.82
CCDC112Q8NEF3 AC012065.2-201ENST00000421295 375 ntBASIC3.7□□□□□ -1.82
CCDC112Q8NEF3 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.7□□□□□ -1.82
CCDC112Q8NEF3 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC112Q8NEF3 Z99127.3-201ENST00000448158 395 ntBASIC3.7□□□□□ -1.82
CCDC112Q8NEF3 RAB28P3-201ENST00000448325 597 ntBASIC3.7□□□□□ -1.82
CCDC112Q8NEF3 PRSS3P4-201ENST00000453323 162 ntBASIC3.7□□□□□ -1.82
CCDC112Q8NEF3 SNORD108-201ENST00000459332 71 ntBASIC3.7□□□□□ -1.82
CCDC112Q8NEF3 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.7□□□□□ -1.82
CCDC112Q8NEF3 AC012170.1-201ENST00000495139 359 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms