Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 RNU6-839P-201ENST00000363347 108 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 RNU6-1214P-201ENST00000363650 109 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 RN7SKP227-201ENST00000364445 330 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 Y_RNA.465-201ENST00000384293 102 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 RNU6-1151P-201ENST00000384684 107 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 SNORD65.1-201ENST00000390889 71 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 AL022722.2-201ENST00000402519 180 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 GTF2IP23-201ENST00000423746 351 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 RPS27AP12-201ENST00000429552 465 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 PRELID3BP10-201ENST00000431957 584 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 RPS6P15-201ENST00000431996 751 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 USP9YP22-201ENST00000438971 294 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 FGF7P5-201ENST00000441829 291 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 MTATP6P26-201ENST00000445926 662 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 AC048346.1-201ENST00000510247 144 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 AC108043.1-201ENST00000512696 574 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 FABP5P12-201ENST00000515543 389 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 SNORA3.4-201ENST00000515969 96 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 HIGD1AP6-201ENST00000521833 279 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 AC090281.1-201ENST00000523019 276 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 ZNF321P-202ENST00000550843 495 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 AC021171.1-201ENST00000603137 706 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 AL139395.1-201ENST00000603662 160 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 AL390816.3-201ENST00000604527 1066 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 AP003973.1-201ENST00000604639 691 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 AC116447.1-201ENST00000613153 453 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 AC091304.6-201ENST00000619761 202 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 AC022509.4-201ENST00000621404 572 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 AL445437.1-201ENST00000623157 3087 ntBASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PCDH20Q8N6Y1 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 FAM133CP-201ENST00000332869 704 ntBASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 RNU6-560P-201ENST00000364007 108 ntBASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 SNORD74.4-201ENST00000364129 80 ntBASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 MIR217-201ENST00000384817 110 ntBASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 AL049545.1-201ENST00000401856 572 ntBASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 FABP12P1-201ENST00000401911 322 ntBASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 AL603766.1-201ENST00000407763 664 ntBASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 RN7SKP33-201ENST00000410942 340 ntBASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 RNU6-603P-201ENST00000411403 107 ntBASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 RPS23P10-201ENST00000416185 486 ntBASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 AC108032.1-201ENST00000416706 207 ntBASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 PPIAP17-201ENST00000438507 471 ntBASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 RPL23AP76-201ENST00000441860 458 ntBASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 NUTF2P7-201ENST00000453086 375 ntBASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 NECAP1P2-201ENST00000455668 727 ntBASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 RPS7P7-201ENST00000463499 571 ntBASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 AC108145.1-201ENST00000503770 153 ntBASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 MTCO1P35-201ENST00000515270 228 ntBASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 RNA5SP135-201ENST00000517019 125 ntBASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 MIR2116-201ENST00000517221 80 ntBASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 AF279873.1-201ENST00000523393 313 ntBASIC4.26□□□□□ -1.73
PCDH20Q8N6Y1 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms