Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 AC104118.1-201ENST00000607625 1589 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 AC011447.7-201ENST00000624228 1590 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 AL450345.1-202ENST00000605741 3881 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 AC016716.1-201ENST00000265882 708 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 MIR23B-201ENST00000384832 97 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 AL161909.1-201ENST00000397390 712 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 AC068533.2-201ENST00000411872 306 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 CTSL3P-202ENST00000412179 788 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 OR8F1P-201ENST00000425243 930 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 AL158073.1-201ENST00000426848 1104 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 COX6CP12-201ENST00000446748 202 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 PRPF38AP1-201ENST00000451976 933 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 OR9M1P-201ENST00000459641 921 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 RPL21P129-201ENST00000491732 478 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 Y_RNA.719-201ENST00000517156 106 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 AC118273.2-201ENST00000532092 465 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 AC093227.2-201ENST00000589357 285 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 AC020914.6-201ENST00000594327 272 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 AL390838.2-201ENST00000602394 274 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 AC012065.4-201ENST00000602445 679 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 AL133338.2-201ENST00000604292 736 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 AC012409.3-201ENST00000611343 981 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 AC023043.4-201ENST00000612081 449 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 AL356321.1-201ENST00000621360 228 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 ZNF137P-201ENST00000456718 1920 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 TRIM51GP-201ENST00000534741 1350 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 Z99496.1-201ENST00000469424 1477 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 SAMMSON-213ENST00000641336 1521 ntBASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SLC44A3Q8N4M1 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 PABPC1P9-201ENST00000426076 1612 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 OR10J6P-201ENST00000289731 930 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 RNA5SP28-201ENST00000363841 119 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 RNU1-85P-201ENST00000364127 164 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 RNU6-374P-201ENST00000364146 108 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 RNU1-64P-201ENST00000365443 163 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 SNORA70C-201ENST00000384538 135 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 MIR134-201ENST00000385258 73 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 AC025750.1-201ENST00000399891 379 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 RPL21P67-201ENST00000402896 478 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 AL356387.2-201ENST00000422272 243 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 RPL23AP4-201ENST00000427757 463 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 UBE2V1P3-201ENST00000439651 417 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 ELOCP10-201ENST00000440624 327 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 RPL7AP61-201ENST00000443410 636 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 H2AFZP5-201ENST00000446960 382 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 VN1R10P-201ENST00000447106 875 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 VN1R34P-201ENST00000447387 883 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 NANOGNBP1-201ENST00000448444 480 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 NUTF2P3-201ENST00000448540 384 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 BX248409.1-201ENST00000455497 255 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 AC021660.1-201ENST00000465006 554 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 RPL30P9-201ENST00000465586 330 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 RN7SL303P-201ENST00000469773 251 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 AC098583.1-201ENST00000480875 255 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 AC015795.1-201ENST00000513669 327 ntBASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.86□□□□□ -1.63
SLC44A3Q8N4M1 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms