Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 MTCYBP39-201ENST00000437562 491 ntBASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 RPL23AP93-201ENST00000440847 484 ntBASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 NDUFA12P1-201ENST00000455914 406 ntBASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 ACTG1P13-201ENST00000486987 1043 ntBASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 IGLV2-34-201ENST00000490007 283 ntBASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AC139783.2-201ENST00000504847 1145 ntBASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AC010285.3-201ENST00000511668 676 ntBASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AC115085.1-201ENST00000588924 229 ntBASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 RSL24D1P11-201ENST00000591045 491 ntBASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AC073544.2-201ENST00000601155 540 ntBASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 PSMA6P4-201ENST00000603247 718 ntBASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AC123786.2-201ENST00000603459 275 ntBASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AC080078.2-201ENST00000603766 501 ntBASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AC211433.2-201ENST00000608433 387 ntBASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AP004247.3-201ENST00000608682 624 ntBASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AC009704.2-201ENST00000618739 483 ntBASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AC018926.3-201ENST00000618841 406 ntBASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AL023881.1-201ENST00000621088 301 ntBASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AC073348.1-201ENST00000623002 331 ntBASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 MAPK10-263ENST00000641052 4307 ntBASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AC139769.1-204ENST00000472297 1931 ntBASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 AL353743.4-201ENST00000422653 1547 ntBASIC4.16□□□□□ -1.74
CLIP4Q8N3C7 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.15□□□□□ -1.74
CLIP4Q8N3C7 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
CLIP4Q8N3C7 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.15□□□□□ -1.74
CLIP4Q8N3C7 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CLIP4Q8N3C7 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.74
CLIP4Q8N3C7 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.15□□□□□ -1.74
CLIP4Q8N3C7 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
CLIP4Q8N3C7 CPHL1P-201ENST00000461341 3407 ntBASIC4.15□□□□□ -1.74
CLIP4Q8N3C7 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.15□□□□□ -1.74
CLIP4Q8N3C7 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 RNU6-839P-201ENST00000363347 108 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 RNU6-621P-201ENST00000364752 109 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 Y_RNA.559-201ENST00000384686 107 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 MIR659-201ENST00000384963 97 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 FABP12P1-201ENST00000401911 322 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 Y_RNA.619-201ENST00000410951 90 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 MTCO1P21-201ENST00000416634 589 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 RPS12P10-201ENST00000427031 377 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 RPL12P3-201ENST00000440080 396 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 MTND1P27-201ENST00000451117 902 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AC092324.1-201ENST00000468671 324 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 RPL23AP71-201ENST00000470966 469 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 SETP11-201ENST00000473027 690 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 RPL12P20-201ENST00000475538 479 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AL024509.2-201ENST00000493462 493 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AC048346.1-201ENST00000510247 144 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AC010625.1-201ENST00000511296 403 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AC091965.2-201ENST00000512324 613 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 MTCO2P32-201ENST00000514865 403 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 RN7SKP31-201ENST00000516354 278 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 Y_RNA.695-201ENST00000516715 107 ntBASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
CLIP4Q8N3C7 AC090151.1-201ENST00000520784 730 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms