Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.37□□□□□ -1.55
SYNE4Q8N205 AC146944.2-203ENST00000502493 354 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.37□□□□□ -1.55
SYNE4Q8N205 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SYNE4Q8N205 AC004069.2-201ENST00000505438 1114 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.37□□□□□ -1.55
SYNE4Q8N205 CBX3P3-201ENST00000508108 532 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 AC113347.3-201ENST00000509113 148 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 PGBD4P4-201ENST00000509673 613 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 AC079140.3-201ENST00000511111 550 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.37□□□□□ -1.55
SYNE4Q8N205 AC139495.1-202ENST00000513164 354 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.37□□□□□ -1.55
SYNE4Q8N205 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.37□□□□□ -1.55
SYNE4Q8N205 AP005205.1-201ENST00000563503 508 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC5.37□□□□□ -1.55
SYNE4Q8N205 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.37□□□□□ -1.55
SYNE4Q8N205 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.37□□□□□ -1.55
SYNE4Q8N205 RPL7P50-201ENST00000600588 727 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 Z98200.1-201ENST00000607298 470 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 AL391497.1-201ENST00000608671 547 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 AC008083.4-201ENST00000615076 444 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 AC022140.2-201ENST00000623500 188 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.37□□□□□ -1.55
SYNE4Q8N205 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.37□□□□□ -1.55
SYNE4Q8N205 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.37□□□□□ -1.55
SYNE4Q8N205 ZNF663P-202ENST00000641770 1131 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SYNE4Q8N205 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SYNE4Q8N205 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SYNE4Q8N205 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SYNE4Q8N205 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SYNE4Q8N205 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
SYNE4Q8N205 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.37□□□□□ -1.55
SYNE4Q8N205 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SYNE4Q8N205 AC087359.1-201ENST00000508335 1740 ntBASIC5.37□□□□□ -1.55
SYNE4Q8N205 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.37□□□□□ -1.55
SYNE4Q8N205 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SYNE4Q8N205 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.36□□□□□ -1.55
SYNE4Q8N205 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.36□□□□□ -1.55
SYNE4Q8N205 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SYNE4Q8N205 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SYNE4Q8N205 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SYNE4Q8N205 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SYNE4Q8N205 AL391994.1-201ENST00000254724 282 ntBASIC5.36□□□□□ -1.55
SYNE4Q8N205 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SYNE4Q8N205 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SYNE4Q8N205 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.36□□□□□ -1.55
SYNE4Q8N205 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SYNE4Q8N205 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
SYNE4Q8N205 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
SYNE4Q8N205 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SYNE4Q8N205 AL034374.1-201ENST00000406329 351 ntBASIC5.36□□□□□ -1.55
SYNE4Q8N205 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SYNE4Q8N205 RNU6-920P-201ENST00000410926 92 ntBASIC5.36□□□□□ -1.55
SYNE4Q8N205 AL663109.1-201ENST00000411498 844 ntBASIC5.36□□□□□ -1.55
SYNE4Q8N205 PGBD4P8-201ENST00000412993 562 ntBASIC5.36□□□□□ -1.55
SYNE4Q8N205 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.36□□□□□ -1.55
SYNE4Q8N205 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.36□□□□□ -1.55
SYNE4Q8N205 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC5.36□□□□□ -1.55
SYNE4Q8N205 MTCO1P54-201ENST00000430139 712 ntBASIC5.36□□□□□ -1.55
SYNE4Q8N205 HMGB3P10-201ENST00000434734 572 ntBASIC5.36□□□□□ -1.55
SYNE4Q8N205 RBMX2P4-201ENST00000441256 376 ntBASIC5.36□□□□□ -1.55
SYNE4Q8N205 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.36□□□□□ -1.55
SYNE4Q8N205 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.36□□□□□ -1.55
SYNE4Q8N205 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SYNE4Q8N205 AC027673.1-201ENST00000456245 405 ntBASIC5.36□□□□□ -1.55
SYNE4Q8N205 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.36□□□□□ -1.55
SYNE4Q8N205 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.36□□□□□ -1.55
SYNE4Q8N205 AC109458.1-201ENST00000508858 316 ntBASIC5.36□□□□□ -1.55
SYNE4Q8N205 LTV1P1-201ENST00000510683 1237 ntBASIC5.36□□□□□ -1.55
SYNE4Q8N205 KCTD9P2-201ENST00000512203 1013 ntBASIC5.36□□□□□ -1.55
SYNE4Q8N205 AC099522.1-202ENST00000514718 367 ntBASIC5.36□□□□□ -1.55
SYNE4Q8N205 AP002963.1-201ENST00000530590 184 ntBASIC5.36□□□□□ -1.55
SYNE4Q8N205 AC027104.1-201ENST00000563702 681 ntBASIC5.36□□□□□ -1.55
SYNE4Q8N205 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.36□□□□□ -1.55
SYNE4Q8N205 RN7SL703P-201ENST00000578485 302 ntBASIC5.36□□□□□ -1.55
SYNE4Q8N205 AC107982.3-201ENST00000584957 985 ntBASIC5.36□□□□□ -1.55
SYNE4Q8N205 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.36□□□□□ -1.55
SYNE4Q8N205 AC011451.2-201ENST00000604303 598 ntBASIC5.36□□□□□ -1.55
SYNE4Q8N205 AC008966.2-201ENST00000606157 453 ntBASIC5.36□□□□□ -1.55
SYNE4Q8N205 AC099669.2-201ENST00000616549 437 ntBASIC5.36□□□□□ -1.55
SYNE4Q8N205 AL356266.1-201ENST00000623311 483 ntBASIC5.36□□□□□ -1.55
SYNE4Q8N205 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.36□□□□□ -1.55
SYNE4Q8N205 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.36□□□□□ -1.55
SYNE4Q8N205 MAPK10-304ENST00000641341 3984 ntBASIC5.36□□□□□ -1.55
SYNE4Q8N205 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SYNE4Q8N205 FAM91A3P-201ENST00000456826 2544 ntBASIC5.36□□□□□ -1.55
SYNE4Q8N205 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SYNE4Q8N205 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SYNE4Q8N205 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SYNE4Q8N205 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SYNE4Q8N205 THAP12P5-201ENST00000405864 2275 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SYNE4Q8N205 CASC19-204ENST00000641001 2055 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 AP000776.1-201ENST00000530032 1663 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SYNE4Q8N205 TCP11X1-202ENST00000622971 1372 ntBASIC5.35□□□□□ -1.55
SYNE4Q8N205 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.35□□□□□ -1.55
SYNE4Q8N205 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms