Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 AC007546.2-201ENST00000623996 360 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 AP001784.1-201ENST00000624107 428 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 AC139769.1-204ENST00000472297 1931 ntBASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LINC01561Q8N1V8 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AC097714.1-201ENST00000511272 1647 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AC108467.2-201ENST00000617640 1597 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AC010300.1-201ENST00000600671 5134 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AL136164.4-201ENST00000625013 2135 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 CPHL1P-201ENST00000461341 3407 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 RNU6-50P-201ENST00000362356 103 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 RNA5SP295-201ENST00000362655 121 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AL136310.1-201ENST00000404926 654 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AP000567.1-201ENST00000406413 156 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AL450338.1-201ENST00000407987 512 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 RNU2-15P-201ENST00000410692 191 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 RNU2-42P-201ENST00000410697 113 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 RPS23P10-201ENST00000416185 486 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 BX510359.2-201ENST00000417920 305 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 DUTP6-201ENST00000425573 462 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 PRELID3BP10-201ENST00000431957 584 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 MTND4LP10-201ENST00000435146 291 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 MTND4P6-201ENST00000438297 472 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AC073850.1-201ENST00000449243 255 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 RPL7P22-201ENST00000466005 733 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AC004815.1-201ENST00000484185 331 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 HIGD1AP14-201ENST00000507617 282 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AC026412.2-201ENST00000512270 1075 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 HNRNPKP5-201ENST00000515300 253 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 IGLV3-26-201ENST00000520756 302 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 IFITM8P-201ENST00000522529 394 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 BGLT3-201ENST00000564523 994 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AC087481.2-201ENST00000565492 330 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 MTND3P13-201ENST00000574391 343 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 MIR4644-201ENST00000579929 84 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 XIAPP1-201ENST00000603162 600 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AC110741.2-201ENST00000605278 268 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AC022509.4-201ENST00000621404 572 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AL590240.3-201ENST00000621416 943 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AP002799.1-201ENST00000623552 423 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 AC091925.2-201ENST00000625059 256 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 U3.53-201ENST00000628922 216 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 MIR1322-201ENST00000638013 71 ntBASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.04□□□□□ -1.92
LINC01561Q8N1V8 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms